(8 nodes) Taurine and hypotaurine metabolism network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XSS1_BRAFL	Uncharacterized protein. (538 aa)
	C3XV41_BRAFL	Uncharacterized protein. (591 aa)
	C3XV43_BRAFL	Uncharacterized protein. (602 aa)
	C3XV44_BRAFL	Uncharacterized protein. (225 aa)
	C3YIY1_BRAFL	Uncharacterized protein. (249 aa)
	C3YQF3_BRAFL	Uncharacterized protein. (637 aa)
	C3ZED9_BRAFL	Uncharacterized protein. (479 aa)
	C3ZH05_BRAFL	Uncharacterized protein. (525 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XSS1_BRAFL	C3XV41_BRAFL	C3XSS1	C3XV41	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XSS1_BRAFL	C3XV43_BRAFL	C3XSS1	C3XV43	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XSS1_BRAFL	C3XV44_BRAFL	C3XSS1	C3XV44	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XSS1_BRAFL	C3YIY1_BRAFL	C3XSS1	C3YIY1	Uncharacterized protein.	Uncharacterized protein.	0.910
C3XSS1_BRAFL	C3YQF3_BRAFL	C3XSS1	C3YQF3	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XSS1_BRAFL	C3ZED9_BRAFL	C3XSS1	C3ZED9	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XSS1_BRAFL	C3ZH05_BRAFL	C3XSS1	C3ZH05	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XV41_BRAFL	C3XSS1_BRAFL	C3XV41	C3XSS1	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XV41_BRAFL	C3XV43_BRAFL	C3XV41	C3XV43	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XV41_BRAFL	C3XV44_BRAFL	C3XV41	C3XV44	Uncharacterized protein.	Uncharacterized protein.	0.901
C3XV41_BRAFL	C3YQF3_BRAFL	C3XV41	C3YQF3	Uncharacterized protein.	Uncharacterized protein.	0.905
C3XV41_BRAFL	C3ZED9_BRAFL	C3XV41	C3ZED9	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XV41_BRAFL	C3ZH05_BRAFL	C3XV41	C3ZH05	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XV43_BRAFL	C3XSS1_BRAFL	C3XV43	C3XSS1	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XV43_BRAFL	C3XV41_BRAFL	C3XV43	C3XV41	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XV43_BRAFL	C3XV44_BRAFL	C3XV43	C3XV44	Uncharacterized protein.	Uncharacterized protein.	0.905
C3XV43_BRAFL	C3YQF3_BRAFL	C3XV43	C3YQF3	Uncharacterized protein.	Uncharacterized protein.	0.906
C3XV43_BRAFL	C3ZED9_BRAFL	C3XV43	C3ZED9	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XV43_BRAFL	C3ZH05_BRAFL	C3XV43	C3ZH05	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XV44_BRAFL	C3XSS1_BRAFL	C3XV44	C3XSS1	Uncharacterized protein.	Uncharacterized protein.	0.903