(34 nodes) Other types of O-glycan biosynthesis network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XR34_BRAFL	Uncharacterized protein. (262 aa)
	C3XRL8_BRAFL	Polypeptide N-acetylgalactosaminyltransferase. (545 aa)
	C3XRR2_BRAFL	Uncharacterized protein. (186 aa)
	C3Y110_BRAFL	Uncharacterized protein. (397 aa)
	C3Y161_BRAFL	Uncharacterized protein. (391 aa)
	C3Y1L7_BRAFL	Uncharacterized protein. (417 aa)
	C3Y943_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (590 aa)
	C3YAY6_BRAFL	Uncharacterized protein. (183 aa)
	C3YBV8_BRAFL	Polypeptide N-acetylgalactosaminyltransferase. (595 aa)
	C3YBZ3_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (371 aa)
	st6gal1/2	Beta-galactoside alpha 2,6-sialyltransferase ST6Gal I/II; Belongs to the glycosyltransferase 29 family. (351 aa)
	C3YJ77_BRAFL	Polypeptide N-acetylgalactosaminyltransferase. (501 aa)
	C3YLQ5_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (319 aa)
	C3YQJ1_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (480 aa)
	C3YRN5_BRAFL	Polypeptide N-acetylgalactosaminyltransferase. (561 aa)
	C3YUI0_BRAFL	CAP10 domain-containing protein. (351 aa)
	C3YVI9_BRAFL	Uncharacterized protein. (499 aa)
	C3YVU2_BRAFL	Polypeptide N-acetylgalactosaminyltransferase. (432 aa)
	C3YX96_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (249 aa)
	C3YYB0_BRAFL	Uncharacterized protein. (119 aa)
	C3YYX3_BRAFL	Uncharacterized protein. (267 aa)
	C3Z721_BRAFL	Beta-1,3-N-acetylglucosaminyltransferase. (381 aa)
	C3Z7X8_BRAFL	Uncharacterized protein. (283 aa)
	C3Z7X9_BRAFL	Uncharacterized protein. (248 aa)
	C3Z7Y0_BRAFL	Uncharacterized protein. (215 aa)
	C3Z8K9_BRAFL	Uncharacterized protein. (356 aa)
	C3ZGU3_BRAFL	Glyco_trans_2-like domain-containing protein. (374 aa)
	C3ZMS5_BRAFL	Ricin B-type lectin domain-containing protein; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily. (1466 aa)
	C3ZNE7_BRAFL	Polypeptide N-acetylgalactosaminyltransferase. (534 aa)
	C3ZPJ4_BRAFL	Uncharacterized protein. (181 aa)
	C3ZQI4_BRAFL	Uncharacterized protein. (588 aa)
	C3ZRY2_BRAFL	Glyco_trans_2-like domain-containing protein. (415 aa)
	C3ZTD7_BRAFL	Uncharacterized protein. (352 aa)
	C4A018_BRAFL	Uncharacterized protein. (254 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XR34_BRAFL	C3XRL8_BRAFL	C3XR34	C3XRL8	Uncharacterized protein.	Polypeptide N-acetylgalactosaminyltransferase.	0.676
C3XR34_BRAFL	C3YBV8_BRAFL	C3XR34	C3YBV8	Uncharacterized protein.	Polypeptide N-acetylgalactosaminyltransferase.	0.677
C3XR34_BRAFL	C3YJ77_BRAFL	C3XR34	C3YJ77	Uncharacterized protein.	Polypeptide N-acetylgalactosaminyltransferase.	0.685
C3XR34_BRAFL	C3YRN5_BRAFL	C3XR34	C3YRN5	Uncharacterized protein.	Polypeptide N-acetylgalactosaminyltransferase.	0.664
C3XR34_BRAFL	C3YVU2_BRAFL	C3XR34	C3YVU2	Uncharacterized protein.	Polypeptide N-acetylgalactosaminyltransferase.	0.677
C3XR34_BRAFL	C3YYB0_BRAFL	C3XR34	C3YYB0	Uncharacterized protein.	Uncharacterized protein.	0.676
C3XR34_BRAFL	C3YYX3_BRAFL	C3XR34	C3YYX3	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XR34_BRAFL	C3Z8K9_BRAFL	C3XR34	C3Z8K9	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XR34_BRAFL	C3ZGU3_BRAFL	C3XR34	C3ZGU3	Uncharacterized protein.	Glyco_trans_2-like domain-containing protein.	0.677
C3XR34_BRAFL	C3ZMS5_BRAFL	C3XR34	C3ZMS5	Uncharacterized protein.	Ricin B-type lectin domain-containing protein; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.	0.655
C3XR34_BRAFL	C3ZNE7_BRAFL	C3XR34	C3ZNE7	Uncharacterized protein.	Polypeptide N-acetylgalactosaminyltransferase.	0.664
C3XR34_BRAFL	C3ZPJ4_BRAFL	C3XR34	C3ZPJ4	Uncharacterized protein.	Uncharacterized protein.	0.655
C3XR34_BRAFL	C3ZRY2_BRAFL	C3XR34	C3ZRY2	Uncharacterized protein.	Glyco_trans_2-like domain-containing protein.	0.699
C3XRL8_BRAFL	C3XR34_BRAFL	C3XRL8	C3XR34	Polypeptide N-acetylgalactosaminyltransferase.	Uncharacterized protein.	0.676
C3XRL8_BRAFL	C3YYX3_BRAFL	C3XRL8	C3YYX3	Polypeptide N-acetylgalactosaminyltransferase.	Uncharacterized protein.	0.676
C3XRL8_BRAFL	C3Z8K9_BRAFL	C3XRL8	C3Z8K9	Polypeptide N-acetylgalactosaminyltransferase.	Uncharacterized protein.	0.676
C3XRR2_BRAFL	C3Y943_BRAFL	C3XRR2	C3Y943	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.678
C3XRR2_BRAFL	C3YBZ3_BRAFL	C3XRR2	C3YBZ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911
C3XRR2_BRAFL	C3YLQ5_BRAFL	C3XRR2	C3YLQ5	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.678
C3XRR2_BRAFL	C3YQJ1_BRAFL	C3XRR2	C3YQJ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911