96 items (Petromyzon marinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S4R486_PETMA	Signal peptide peptidase-like 2. (502 aa)
	S4R524_PETMA	Solute carrier family 26 member 11. (511 aa)
	S4R5A0_PETMA	Uncharacterized protein. (83 aa)
	S4R5A3_PETMA	Si:dkey-83h2.3. (202 aa)
	S4R5A5_PETMA	Solute carrier family 39 member 14. (351 aa)
	S4R5D3_PETMA	Cytochrome b reductase 1. (256 aa)
	S4R5G3_PETMA	Uncharacterized protein. (270 aa)
	S4R5N3_PETMA	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (210 aa)
	S4R608_PETMA	DNA-damage regulated autophagy modulator 2b. (145 aa)
	S4R755_PETMA	Uncharacterized protein. (589 aa)
	S4R7Y4_PETMA	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated. (241 aa)
	LAMP5	Lysosomal associated membrane protein family member 5. (281 aa)
	S4R887_PETMA	Si:ch211-125a15.1. (462 aa)
	S4R8I5_PETMA	Transient receptor potential cation channel, subfamily M, member 2. (1109 aa)
	S4R8T6_PETMA	Biogenesis of lysosomal organelles complex-1, subunit 1. (79 aa)
	S4R959_PETMA	NPR3-like, GATOR1 complex subunit. (578 aa)
	S4R9K5_PETMA	Synaptobrevin-like 1; Belongs to the synaptobrevin family. (168 aa)
	S4R9M5_PETMA	NPR2 like, GATOR1 complex subunit. (380 aa)
	S4R9S2_PETMA	Pleckstrin homology domain containing, family M (with RUN domain) member 2. (915 aa)
	FFAR4	Free fatty acid receptor 4. (318 aa)
	S4RAP4_PETMA	ATP-binding cassette, sub-family D (ALD), member 4. (595 aa)
	S4RAQ4_PETMA	Battenin. (411 aa)
	SORT1	Sortilin. (714 aa)
	S4RAT2_PETMA	Uncharacterized protein; Belongs to the CD36 family. (489 aa)
	S4RB05_PETMA	Uncharacterized protein. (525 aa)
	S4RB54_PETMA	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (163 aa)
	NEU1	Neuraminidase 1. (387 aa)
	S4RC57_PETMA	G protein-coupled receptor 143. (326 aa)
	S4RCC0_PETMA	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (112 aa)
	S4RD85_PETMA	Membrane-associated ring finger (C3HC4) 8. (231 aa)
	S4RDN5_PETMA	ATG_C domain-containing protein. (158 aa)
	SORT1-2	Sortilin. (684 aa)
	S4RDX1_PETMA	Chorein_N domain-containing protein. (96 aa)
	S4RE09_PETMA	Leucine rich repeat containing 8 VRAC subunit Ab. (489 aa)
	ATP6V1G3	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (120 aa)
	S4REA5_PETMA	Uncharacterized protein. (143 aa)
	S4REN5_PETMA	Vesicle transport through interaction with t-SNAREs 1B. (232 aa)
	S4RFD6_PETMA	Solute carrier family 49 member 4. (486 aa)
	S4RFL9_PETMA	VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family. (625 aa)
	S4RG04_PETMA	Uncharacterized protein. (213 aa)
	S4RGB0_PETMA	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (375 aa)
	S4RHG0_PETMA	VPS18 core subunit of CORVET and HOPS complexes. (965 aa)
	S4RHM5_PETMA	UDENN FNIP1/2-type domain-containing protein. (467 aa)
	S4RHM8_PETMA	Uncharacterized protein. (82 aa)
	ABCB6	ATP binding cassette subfamily B member 6 (Langereis blood group). (472 aa)
	S4RIT1_PETMA	WD repeat domain 59. (457 aa)
	S4RIT6_PETMA	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (848 aa)
	SLC48A1	Solute carrier family 48 member 1. (146 aa)
	S4RJ83_PETMA	Tetraspanin. (254 aa)
	S4RJ97_PETMA	Uncharacterized protein. (229 aa)
	S4RJZ6_PETMA	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (151 aa)
	S4RKA1_PETMA	Pleckstrin homology domain containing, family M (with RUN domain) member 1. (1004 aa)
	S4RKI3_PETMA	Solute carrier family 66 member 1. (275 aa)
	S4RKW6_PETMA	TMEM9 domain family, member B. (186 aa)
	S4RKY3_PETMA	DEP domain-containing protein. (1477 aa)
	S4RLN6_PETMA	Transmembrane protein 106Bb. (204 aa)
	S4RM90_PETMA	VPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family. (575 aa)
	S4RMH6_PETMA	Signal peptide peptidase-like 2. (287 aa)
	WDR24	WD repeat domain 24. (401 aa)
	S4RMP5_PETMA	Im:7160594. (278 aa)
	S4RNF8_PETMA	Solute carrier family 46 member 3. (443 aa)
	S4RNW5_PETMA	Zgc:172079. (127 aa)
	S4RP07_PETMA	Major facilitator superfamily domain containing 1. (529 aa)
	S4RP15_PETMA	UDENN FLCN/SMCR8-type domain-containing protein. (134 aa)
	S4RPR0_PETMA	Folliculin interacting protein 1. (1088 aa)
	S4RPR8_PETMA	Integrin alpha FG-GAP repeat containing 2. (415 aa)
	S4RRA3_PETMA	CLN5 intracellular trafficking protein. (329 aa)
	SLC48A1-2	Solute carrier family 48 member 1. (146 aa)
	S4RRF3_PETMA	Glycosylated lysosomal membrane protein. (404 aa)
	S4RRP5_PETMA	Two pore segment channel 3. (745 aa)
	S4RRQ1_PETMA	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (441 aa)
	S4RSG4_PETMA	VPS39 subunit of HOPS complex. (414 aa)
	S4RSJ5_PETMA	BLOC-1 related complex subunit 8. (104 aa)
	S4RSQ2_PETMA	Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family. (512 aa)
	S4RST2_PETMA	ADP-ribosylation factor-like 8Ba; Belongs to the small GTPase superfamily. Arf family. (186 aa)
	S4RT44_PETMA	Major facilitator superfamily domain containing 8. (311 aa)
	S4RT54_PETMA	Solute carrier family 49 member 4. (466 aa)
	S4RTC0_PETMA	G protein-coupled receptor 137c. (361 aa)
	S4RTR2_PETMA	t-SNARE coiled-coil homology domain-containing protein. (239 aa)
	S4RU07_PETMA	Charged multivesicular body protein 3. (222 aa)
	ZNRF2	RING-type domain-containing protein. (91 aa)
	S4RUD6_PETMA	MFS domain-containing protein. (166 aa)
	OCLN-2	Occludin. (294 aa)
	S4RVM2_PETMA	Granulin b. (757 aa)
	S4RW61_PETMA	Uncharacterized protein. (155 aa)
	NEU1-2	Neuraminidase 1. (360 aa)
	S4RWV1_PETMA	Uncharacterized protein. (294 aa)
	S4RXC1_PETMA	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (937 aa)
	S4RXG3_PETMA	Uncharacterized protein. (269 aa)
	S4RXL8_PETMA	Aamy domain-containing protein. (373 aa)
	S4RXL9_PETMA	Lysosomal protein transmembrane 4 beta. (235 aa)
	S4RY92_PETMA	Tectonin beta-propeller repeat containing 1b. (1170 aa)
	WDR59	WD repeat domain 59. (426 aa)
	S4RYF1_PETMA	C-type lectin domain containing 16A. (604 aa)
	S4RYJ7_PETMA	BLOC-1 related complex subunit 5. (188 aa)
	S4RYK6_PETMA	Ncstrn_small domain-containing protein. (193 aa)

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCB6	S4RAP4_PETMA	ENSPMAP00000004737	ENSPMAP00000002275	ATP binding cassette subfamily B member 6 (Langereis blood group).	ATP-binding cassette, sub-family D (ALD), member 4.	0.447
ATP6V1G3	S4RPR0_PETMA	ENSPMAP00000003530	ENSPMAP00000007196	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Folliculin interacting protein 1.	0.600
LAMP5	S4R5N3_PETMA	ENSPMAP00000001360	ENSPMAP00000000513	Lysosomal associated membrane protein family member 5.	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	0.586
LAMP5	S4R959_PETMA	ENSPMAP00000001360	ENSPMAP00000001740	Lysosomal associated membrane protein family member 5.	NPR3-like, GATOR1 complex subunit.	0.595
LAMP5	S4R9M5_PETMA	ENSPMAP00000001360	ENSPMAP00000001906	Lysosomal associated membrane protein family member 5.	NPR2 like, GATOR1 complex subunit.	0.612
LAMP5	S4RB54_PETMA	ENSPMAP00000001360	ENSPMAP00000002435	Lysosomal associated membrane protein family member 5.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.547
LAMP5	S4RCC0_PETMA	ENSPMAP00000001360	ENSPMAP00000002852	Lysosomal associated membrane protein family member 5.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.547
LAMP5	S4RIT1_PETMA	ENSPMAP00000001360	ENSPMAP00000005113	Lysosomal associated membrane protein family member 5.	WD repeat domain 59.	0.524
LAMP5	S4RKY3_PETMA	ENSPMAP00000001360	ENSPMAP00000005866	Lysosomal associated membrane protein family member 5.	DEP domain-containing protein.	0.586
LAMP5	S4RPR8_PETMA	ENSPMAP00000001360	ENSPMAP00000007204	Lysosomal associated membrane protein family member 5.	Integrin alpha FG-GAP repeat containing 2.	0.524
LAMP5	WDR24	ENSPMAP00000001360	ENSPMAP00000006430	Lysosomal associated membrane protein family member 5.	WD repeat domain 24.	0.591
LAMP5	WDR59	ENSPMAP00000001360	ENSPMAP00000010184	Lysosomal associated membrane protein family member 5.	WD repeat domain 59.	0.524
OCLN-2	S4R5N3_PETMA	ENSPMAP00000008874	ENSPMAP00000000513	Occludin.	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	0.580
OCLN-2	S4RB54_PETMA	ENSPMAP00000008874	ENSPMAP00000002435	Occludin.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.553
OCLN-2	S4RCC0_PETMA	ENSPMAP00000008874	ENSPMAP00000002852	Occludin.	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.553
S4R5A0_PETMA	S4R7Y4_PETMA	ENSPMAP00000000380	ENSPMAP00000001314	Uncharacterized protein.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.558
S4R5A0_PETMA	S4RW61_PETMA	ENSPMAP00000000380	ENSPMAP00000009451	Uncharacterized protein.	Uncharacterized protein.	0.551
S4R5N3_PETMA	LAMP5	ENSPMAP00000000513	ENSPMAP00000001360	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	Lysosomal associated membrane protein family member 5.	0.586
S4R5N3_PETMA	OCLN-2	ENSPMAP00000000513	ENSPMAP00000008874	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	Occludin.	0.580
S4R5N3_PETMA	S4R887_PETMA	ENSPMAP00000000513	ENSPMAP00000001418	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	Si:ch211-125a15.1.	0.706