STRINGSTRING
S4RFL9_PETMA S4RFL9_PETMA MREG MREG S4RYH1_PETMA S4RYH1_PETMA S4RM90_PETMA S4RM90_PETMA DCTN1 DCTN1 S4RHP0_PETMA S4RHP0_PETMA S4RHM8_PETMA S4RHM8_PETMA S4RFU7_PETMA S4RFU7_PETMA S4RC57_PETMA S4RC57_PETMA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
S4RFL9_PETMAVPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family. (625 aa)
MREGMelanoregulin. (154 aa)
S4RYH1_PETMARAB11B, member RAS oncogene family, a. (207 aa)
S4RM90_PETMAVPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family. (575 aa)
DCTN1Dynactin subunit 1. (1286 aa)
S4RHP0_PETMAASD2 domain-containing protein. (371 aa)
S4RHM8_PETMAUncharacterized protein. (82 aa)
S4RFU7_PETMABiogenesis of lysosomal organelles complex-1, subunit 3. (202 aa)
S4RC57_PETMAG protein-coupled receptor 143. (326 aa)
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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