58 items (Petromyzon marinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S4RNQ4_PETMA	RGS domain-containing protein. (208 aa)
	S4RH43_PETMA	Tribbles pseudokinase 3. (244 aa)
	S4RFD1_PETMA	N-ethylmaleimide-sensitive factor a; Belongs to the AAA ATPase family. (545 aa)
	S4RF03_PETMA	Sortilin. (1274 aa)
	S4RDT7_PETMA	Tribbles pseudokinase 3. (352 aa)
	S4RDH1_PETMA	Nardilysin b (N-arginine dibasic convertase). (870 aa)
	S4RCU3_PETMA	Bardet-Biedl syndrome 7. (685 aa)
	S4RCA4_PETMA	Cell division cycle 20 homolog. (503 aa)
	S4RB81_PETMA	Syntaxin-5_N domain-containing protein. (153 aa)
	ASB5	Ankyrin repeat and SOCS box containing 5. (280 aa)
	S4R9T9_PETMA	PID domain-containing protein. (179 aa)
	S4R8Y5_PETMA	Uncharacterized protein. (269 aa)
	S4R8S1_PETMA	Uncharacterized protein. (235 aa)
	S4R7S1_PETMA	RBR-type E3 ubiquitin transferase. (490 aa)
	S4R7Q9_PETMA	AAA domain-containing protein; Belongs to the AAA ATPase family. (441 aa)
	S4R7I3_PETMA	Fizzy/cell division cycle 20 related 1b. (502 aa)
	S4R707_PETMA	Uncharacterized protein. (94 aa)
	S4R6I2_PETMA	Uncharacterized protein. (153 aa)
	S4R6H5_PETMA	NKD inhibitor of WNT signaling pathway 2a. (282 aa)
	S4R6D6_PETMA	Uncharacterized protein. (468 aa)
	S4R671_PETMA	Si:ch1073-82l19.1. (631 aa)
	S4R569_PETMA	COP1 E3 ubiquitin ligase. (567 aa)
	S4R4P9_PETMA	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (793 aa)
	S4RJ98_PETMA	RBR-type E3 ubiquitin transferase. (657 aa)
	S4RJE0_PETMA	Ubiquitin specific peptidase 13; Belongs to the peptidase C19 family. (379 aa)
	S4RK47_PETMA	F-box and leucine-rich repeat protein 5. (637 aa)
	S4RKD3_PETMA	RGS domain-containing protein. (391 aa)
	S4RLF2_PETMA	Vestigial-like family member 4b. (150 aa)
	S4RLQ3_PETMA	AAA domain-containing protein; Belongs to the AAA ATPase family. (319 aa)
	S4RNK7_PETMA	Proteasome 26S subunit, ATPase 1a. (230 aa)
	S4RPQ6_PETMA	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (361 aa)
	S4RQ25_PETMA	Uncharacterized protein. (211 aa)
	S4RQ62_PETMA	Transmembrane O-mannosyltransferase targeting cadherins 3. (428 aa)
	S4RQS1_PETMA	TPR_REGION domain-containing protein. (377 aa)
	S4RQS9_PETMA	Glutamate-cysteine ligase, catalytic subunit. (475 aa)
	S4RQU6_PETMA	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (112 aa)
	STX5	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (310 aa)
	S4RR12_PETMA	DIX domain-containing protein. (282 aa)
	S4RRC1_PETMA	Negative regulator of ubiquitin-like proteins 1. (597 aa)
	S4RS08_PETMA	Vasoactive intestinal peptide b. (89 aa)
	S4RS79_PETMA	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (410 aa)
	S4RT66_PETMA	DIX domain-containing protein. (89 aa)
	S4RT99_PETMA	Casein kinase 1, epsilon; Belongs to the protein kinase superfamily. (351 aa)
	S4RTK7_PETMA	Sirtuin 6. (319 aa)
	S4RUF1_PETMA	Uncharacterized protein. (538 aa)
	S4RUR0_PETMA	DET1 partner of COP1 E3 ubiquitin ligase. (203 aa)
	S4RVG7_PETMA	RBR-type E3 ubiquitin transferase. (125 aa)
	S4RVH3_PETMA	Tribbles pseudokinase 3. (281 aa)
	S4RVN4_PETMA	Ornithine decarboxylase antizyme 1a. (226 aa)
	S4RVV5_PETMA	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (185 aa)
	S4RVX6_PETMA	Damage-specific DNA binding protein 1. (1018 aa)
	S4RXK8_PETMA	RGS domain-containing protein. (346 aa)
	S4RY73_PETMA	RBR-type E3 ubiquitin transferase. (788 aa)
	S4RYG2_PETMA	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (415 aa)
	S4RYI2_PETMA	Serine/threonine-protein kinase PLK. (619 aa)
	GGA3	Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (271 aa)
	S4RZB8_PETMA	Uncharacterized protein. (243 aa)
	S4RZF6_PETMA	Uncharacterized protein. (132 aa)

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASB5	S4R6D6_PETMA	ENSPMAP00000002270	ENSPMAP00000000766	Ankyrin repeat and SOCS box containing 5.	Uncharacterized protein.	0.440
ASB5	S4R7Q9_PETMA	ENSPMAP00000002270	ENSPMAP00000001239	Ankyrin repeat and SOCS box containing 5.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.420
ASB5	S4RLQ3_PETMA	ENSPMAP00000002270	ENSPMAP00000006139	Ankyrin repeat and SOCS box containing 5.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.489
ASB5	S4RNK7_PETMA	ENSPMAP00000002270	ENSPMAP00000006793	Ankyrin repeat and SOCS box containing 5.	Proteasome 26S subunit, ATPase 1a.	0.420
ASB5	S4RS79_PETMA	ENSPMAP00000002270	ENSPMAP00000008068	Ankyrin repeat and SOCS box containing 5.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.420
ASB5	S4RUF1_PETMA	ENSPMAP00000002270	ENSPMAP00000008841	Ankyrin repeat and SOCS box containing 5.	Uncharacterized protein.	0.440
ASB5	S4RYG2_PETMA	ENSPMAP00000002270	ENSPMAP00000010253	Ankyrin repeat and SOCS box containing 5.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.489
S4R4P9_PETMA	S4R7Q9_PETMA	ENSPMAP00000000178	ENSPMAP00000001239	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.640
S4R4P9_PETMA	S4RF03_PETMA	ENSPMAP00000000178	ENSPMAP00000003785	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sortilin.	0.706
S4R569_PETMA	S4R7Q9_PETMA	ENSPMAP00000000349	ENSPMAP00000001239	COP1 E3 ubiquitin ligase.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.542
S4R569_PETMA	S4RDT7_PETMA	ENSPMAP00000000349	ENSPMAP00000003369	COP1 E3 ubiquitin ligase.	Tribbles pseudokinase 3.	0.576
S4R569_PETMA	S4RH43_PETMA	ENSPMAP00000000349	ENSPMAP00000004525	COP1 E3 ubiquitin ligase.	Tribbles pseudokinase 3.	0.576
S4R569_PETMA	S4RNK7_PETMA	ENSPMAP00000000349	ENSPMAP00000006793	COP1 E3 ubiquitin ligase.	Proteasome 26S subunit, ATPase 1a.	0.542
S4R569_PETMA	S4RS79_PETMA	ENSPMAP00000000349	ENSPMAP00000008068	COP1 E3 ubiquitin ligase.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.542
S4R569_PETMA	S4RUR0_PETMA	ENSPMAP00000000349	ENSPMAP00000008950	COP1 E3 ubiquitin ligase.	DET1 partner of COP1 E3 ubiquitin ligase.	0.975
S4R569_PETMA	S4RVH3_PETMA	ENSPMAP00000000349	ENSPMAP00000009213	COP1 E3 ubiquitin ligase.	Tribbles pseudokinase 3.	0.576
S4R569_PETMA	S4RVX6_PETMA	ENSPMAP00000000349	ENSPMAP00000009366	COP1 E3 ubiquitin ligase.	Damage-specific DNA binding protein 1.	0.938
S4R6D6_PETMA	ASB5	ENSPMAP00000000766	ENSPMAP00000002270	Uncharacterized protein.	Ankyrin repeat and SOCS box containing 5.	0.440
S4R707_PETMA	S4R8Y5_PETMA	ENSPMAP00000000987	ENSPMAP00000001666	Uncharacterized protein.	Uncharacterized protein.	0.526
S4R707_PETMA	S4RZF6_PETMA	ENSPMAP00000000987	ENSPMAP00000010597	Uncharacterized protein.	Uncharacterized protein.	0.526