13 items (Petromyzon marinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	TBCCD1	C-CAP/cofactor C-like domain-containing protein. (290 aa)
	S4RX20_PETMA	SUN domain-containing protein. (202 aa)
	S4RVZ6_PETMA	Uncharacterized protein. (8485 aa)
	S4RSA9_PETMA	G protein signaling modulator 1b. (299 aa)
	RANBP2	RAN binding protein 2. (2471 aa)
	S4RLE2_PETMA	Uncharacterized protein. (1067 aa)
	S4RHF3_PETMA	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (220 aa)
	S4RF66_PETMA	Intraflagellar transport 20 homolog (Chlamydomonas). (90 aa)
	S4RCH3_PETMA	NudE neurodevelopment protein 1. (313 aa)
	S4RBN2_PETMA	Uncharacterized protein. (381 aa)
	S4RAG3_PETMA	Uncharacterized protein. (611 aa)
	S4RA67_PETMA	Integrator complex subunit 13. (537 aa)
	S4R5A9_PETMA	Uncharacterized protein. (179 aa)

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RANBP2	S4R5A9_PETMA	ENSPMAP00000007926	ENSPMAP00000000389	RAN binding protein 2.	Uncharacterized protein.	0.488
RANBP2	S4RBN2_PETMA	ENSPMAP00000007926	ENSPMAP00000002613	RAN binding protein 2.	Uncharacterized protein.	0.488
RANBP2	S4RCH3_PETMA	ENSPMAP00000007926	ENSPMAP00000002905	RAN binding protein 2.	NudE neurodevelopment protein 1.	0.475
RANBP2	S4RHF3_PETMA	ENSPMAP00000007926	ENSPMAP00000004635	RAN binding protein 2.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.992
S4R5A9_PETMA	RANBP2	ENSPMAP00000000389	ENSPMAP00000007926	Uncharacterized protein.	RAN binding protein 2.	0.488
S4R5A9_PETMA	S4RAG3_PETMA	ENSPMAP00000000389	ENSPMAP00000002194	Uncharacterized protein.	Uncharacterized protein.	0.428
S4R5A9_PETMA	S4RBN2_PETMA	ENSPMAP00000000389	ENSPMAP00000002613	Uncharacterized protein.	Uncharacterized protein.	0.938
S4R5A9_PETMA	S4RF66_PETMA	ENSPMAP00000000389	ENSPMAP00000003848	Uncharacterized protein.	Intraflagellar transport 20 homolog (Chlamydomonas).	0.709
S4R5A9_PETMA	S4RHF3_PETMA	ENSPMAP00000000389	ENSPMAP00000004635	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.488
S4R5A9_PETMA	S4RLE2_PETMA	ENSPMAP00000000389	ENSPMAP00000006028	Uncharacterized protein.	Uncharacterized protein.	0.428
S4RAG3_PETMA	S4R5A9_PETMA	ENSPMAP00000002194	ENSPMAP00000000389	Uncharacterized protein.	Uncharacterized protein.	0.428
S4RAG3_PETMA	S4RBN2_PETMA	ENSPMAP00000002194	ENSPMAP00000002613	Uncharacterized protein.	Uncharacterized protein.	0.428
S4RAG3_PETMA	S4RSA9_PETMA	ENSPMAP00000002194	ENSPMAP00000008098	Uncharacterized protein.	G protein signaling modulator 1b.	0.577
S4RBN2_PETMA	RANBP2	ENSPMAP00000002613	ENSPMAP00000007926	Uncharacterized protein.	RAN binding protein 2.	0.488
S4RBN2_PETMA	S4R5A9_PETMA	ENSPMAP00000002613	ENSPMAP00000000389	Uncharacterized protein.	Uncharacterized protein.	0.938
S4RBN2_PETMA	S4RAG3_PETMA	ENSPMAP00000002613	ENSPMAP00000002194	Uncharacterized protein.	Uncharacterized protein.	0.428
S4RBN2_PETMA	S4RF66_PETMA	ENSPMAP00000002613	ENSPMAP00000003848	Uncharacterized protein.	Intraflagellar transport 20 homolog (Chlamydomonas).	0.709
S4RBN2_PETMA	S4RHF3_PETMA	ENSPMAP00000002613	ENSPMAP00000004635	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.488
S4RBN2_PETMA	S4RLE2_PETMA	ENSPMAP00000002613	ENSPMAP00000006028	Uncharacterized protein.	Uncharacterized protein.	0.428
S4RCH3_PETMA	RANBP2	ENSPMAP00000002905	ENSPMAP00000007926	NudE neurodevelopment protein 1.	RAN binding protein 2.	0.475