41 items (Petromyzon marinus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S4RU95_PETMA	Uncharacterized protein. (283 aa)
	S4RVG9_PETMA	C2 domain-containing protein. (153 aa)
	S4RXC1_PETMA	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (937 aa)
	S4RY45_PETMA	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	S4RYX2_PETMA	AB hydrolase-1 domain-containing protein. (182 aa)
	S4S152_PETMA	Solute carrier family 18 member 3a. (514 aa)
	ENSPMAP00000011383	annotation not available (79 aa)
	S4RJW5_PETMA	Synergin, gamma. (1314 aa)
	DBNL	Drebrin like. (356 aa)
	S4RMC7_PETMA	Uncharacterized protein. (993 aa)
	S4RMI3_PETMA	Protein kinase domain-containing protein. (951 aa)
	S4RPI9_PETMA	ATPase H+ transporting V1 subunit D. (246 aa)
	S4RPY9_PETMA	Inositol polyphosphate-5-phosphatase F. (485 aa)
	S4RQJ9_PETMA	Clavesin 2. (126 aa)
	S4RQY7_PETMA	Uncharacterized protein. (424 aa)
	S4R496_PETMA	Adaptin_N domain-containing protein. (516 aa)
	S4R4F4_PETMA	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (423 aa)
	S4R4N9_PETMA	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1597 aa)
	S4R5W4_PETMA	Golgi-associated PDZ and coiled-coil motif containing. (286 aa)
	ENSPMAP00000007914	annotation not available (176 aa)
	S4RRB7_PETMA	Alpha_adaptin_C domain-containing protein. (144 aa)
	PHETA1	PH domain containing endocytic trafficking adaptor 1. (228 aa)
	S4R6L1_PETMA	SPG21 abhydrolase domain containing, maspardin. (223 aa)
	S4R6U3_PETMA	SAC domain-containing protein. (109 aa)
	S4R715_PETMA	SH3-domain binding protein 4. (956 aa)
	S4R7G3_PETMA	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...] (450 aa)
	S4R7S6_PETMA	RAB35, member RAS oncogene family b. (126 aa)
	S4R8C9_PETMA	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (133 aa)
	S4R9T0_PETMA	Phytanoyl-CoA dioxygenase domain containing 1. (187 aa)
	S4R9T9_PETMA	PID domain-containing protein. (179 aa)
	S4RA77_PETMA	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (946 aa)
	S4RBI0_PETMA	Clavesin 2. (191 aa)
	AP3B2	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1074 aa)
	S4RD20_PETMA	Epsin 2. (592 aa)
	S4RDW3_PETMA	Alpha_adaptinC2 domain-containing protein. (227 aa)
	S4RE25_PETMA	ATPase H+ transporting V0 subunit b. (73 aa)
	S4RET8_PETMA	Adaptor related protein complex 1 subunit mu 1; Belongs to the adaptor complexes medium subunit family. (275 aa)
	S4RFG4_PETMA	AP complex subunit beta. (955 aa)
	S4RHK9_PETMA	Clathrin interactor 1a. (651 aa)
	S4RIT6_PETMA	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (848 aa)
	S4RIV8_PETMA	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (290 aa)

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP3B2	S4R4F4_PETMA	ENSPMAP00000002866	ENSPMAP00000000083	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.	0.740
AP3B2	S4R4N9_PETMA	ENSPMAP00000002866	ENSPMAP00000000168	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.870
AP3B2	S4R7G3_PETMA	ENSPMAP00000002866	ENSPMAP00000001143	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]	0.740
AP3B2	S4RD20_PETMA	ENSPMAP00000002866	ENSPMAP00000003102	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	Epsin 2.	0.401
AP3B2	S4RET8_PETMA	ENSPMAP00000002866	ENSPMAP00000003720	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	Adaptor related protein complex 1 subunit mu 1; Belongs to the adaptor complexes medium subunit family.	0.740
AP3B2	S4RFG4_PETMA	ENSPMAP00000002866	ENSPMAP00000003946	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP complex subunit beta.	0.830
AP3B2	S4RIT6_PETMA	ENSPMAP00000002866	ENSPMAP00000005118	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.443
AP3B2	S4RIV8_PETMA	ENSPMAP00000002866	ENSPMAP00000005140	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.740
AP3B2	S4RMI3_PETMA	ENSPMAP00000002866	ENSPMAP00000006419	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	Protein kinase domain-containing protein.	0.412
DBNL	S4R4N9_PETMA	ENSPMAP00000005724	ENSPMAP00000000168	Drebrin like.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.408
DBNL	S4RMI3_PETMA	ENSPMAP00000005724	ENSPMAP00000006419	Drebrin like.	Protein kinase domain-containing protein.	0.623
ENSPMAP00000007914	S4R496_PETMA	ENSPMAP00000007914	ENSPMAP00000000025	annotation not available	Adaptin_N domain-containing protein.	0.500
ENSPMAP00000007914	S4R4N9_PETMA	ENSPMAP00000007914	ENSPMAP00000000168	annotation not available	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.808
ENSPMAP00000007914	S4R9T9_PETMA	ENSPMAP00000007914	ENSPMAP00000001970	annotation not available	PID domain-containing protein.	0.435
ENSPMAP00000007914	S4RA77_PETMA	ENSPMAP00000007914	ENSPMAP00000002108	annotation not available	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.500
ENSPMAP00000007914	S4RDW3_PETMA	ENSPMAP00000007914	ENSPMAP00000003395	annotation not available	Alpha_adaptinC2 domain-containing protein.	0.500
ENSPMAP00000007914	S4RFG4_PETMA	ENSPMAP00000007914	ENSPMAP00000003946	annotation not available	AP complex subunit beta.	0.690
ENSPMAP00000007914	S4RHK9_PETMA	ENSPMAP00000007914	ENSPMAP00000004691	annotation not available	Clathrin interactor 1a.	0.717
ENSPMAP00000007914	S4RJW5_PETMA	ENSPMAP00000007914	ENSPMAP00000005498	annotation not available	Synergin, gamma.	0.672
ENSPMAP00000007914	S4RMI3_PETMA	ENSPMAP00000007914	ENSPMAP00000006419	annotation not available	Protein kinase domain-containing protein.	0.451