STRINGSTRING
S4RPT7_PETMA S4RPT7_PETMA S4R4A6_PETMA S4R4A6_PETMA S4R529_PETMA S4R529_PETMA S4R5E4_PETMA S4R5E4_PETMA S4R5N3_PETMA S4R5N3_PETMA S4R606_PETMA S4R606_PETMA S4R6X7_PETMA S4R6X7_PETMA S4RAV4_PETMA S4RAV4_PETMA S4RB21_PETMA S4RB21_PETMA S4RB54_PETMA S4RB54_PETMA S4RBG4_PETMA S4RBG4_PETMA S4RBZ6_PETMA S4RBZ6_PETMA S4RD63_PETMA S4RD63_PETMA S4RFR8_PETMA S4RFR8_PETMA S4RG25_PETMA S4RG25_PETMA S4RGF0_PETMA S4RGF0_PETMA S4RGF7_PETMA S4RGF7_PETMA S4RGK4_PETMA S4RGK4_PETMA S4RH17_PETMA S4RH17_PETMA S4RHF3_PETMA S4RHF3_PETMA S4RHL2_PETMA S4RHL2_PETMA S4RJK5_PETMA S4RJK5_PETMA GEMIN6 GEMIN6 S4RJW4_PETMA S4RJW4_PETMA S4RMF3_PETMA S4RMF3_PETMA S4RMH0_PETMA S4RMH0_PETMA NUP54 NUP54 S4RNF5_PETMA S4RNF5_PETMA S4RP10_PETMA S4RP10_PETMA WDR77 WDR77 S4RQ18_PETMA S4RQ18_PETMA S4RQG5_PETMA S4RQG5_PETMA S4RQS4_PETMA S4RQS4_PETMA RANBP2 RANBP2 S4RRV5_PETMA S4RRV5_PETMA S4RSP5_PETMA S4RSP5_PETMA S4RW40_PETMA S4RW40_PETMA S4RWP9_PETMA S4RWP9_PETMA S4RXH6_PETMA S4RXH6_PETMA S4RYI9_PETMA S4RYI9_PETMA S4RZF0_PETMA S4RZF0_PETMA S4RZY5_PETMA S4RZY5_PETMA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
S4RPT7_PETMANuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (666 aa)
S4R4A6_PETMASmall nuclear ribonucleoprotein G. (76 aa)
S4R529_PETMATudor domain-containing protein. (125 aa)
S4R5E4_PETMAUncharacterized protein. (773 aa)
S4R5N3_PETMASEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (210 aa)
S4R606_PETMAUncharacterized protein. (188 aa)
S4R6X7_PETMANucleoporin 62 like. (545 aa)
S4RAV4_PETMAPeptidase S59 domain-containing protein. (1883 aa)
S4RB21_PETMANDC1 transmembrane nucleoporin. (424 aa)
S4RB54_PETMASEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (163 aa)
S4RBG4_PETMANuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (252 aa)
S4RBZ6_PETMAUncharacterized protein. (816 aa)
S4RD63_PETMANuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (805 aa)
S4RFR8_PETMAWD_REPEATS_REGION domain-containing protein. (458 aa)
S4RG25_PETMANucleoporin 133. (1133 aa)
S4RGF0_PETMANucleoporin 42. (402 aa)
S4RGF7_PETMASmall nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (122 aa)
S4RGK4_PETMAPRMT5_TIM domain-containing protein. (242 aa)
S4RH17_PETMAUncharacterized protein. (289 aa)
S4RHF3_PETMAPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (220 aa)
S4RHL2_PETMANucleoporin 205. (2014 aa)
S4RJK5_PETMASmall nuclear ribonucleoprotein polypeptides B and B1. (89 aa)
GEMIN6Gem nuclear organelle associated protein 6. (179 aa)
S4RJW4_PETMASurvival of motor neuron 1, telomeric. (287 aa)
S4RMF3_PETMANucleoporin 58. (379 aa)
S4RMH0_PETMAUncharacterized protein. (731 aa)
NUP54Nucleoporin 54. (506 aa)
S4RNF5_PETMAGem (nuclear organelle) associated protein 4. (1098 aa)
S4RP10_PETMAProtein arginine methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (237 aa)
WDR77WD repeat domain 77. (179 aa)
S4RQ18_PETMANucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (325 aa)
S4RQG5_PETMANucleoporin 155. (1266 aa)
S4RQS4_PETMAWD_REPEATS_REGION domain-containing protein. (364 aa)
RANBP2RAN binding protein 2. (2471 aa)
S4RRV5_PETMAGem (nuclear organelle) associated protein 8. (143 aa)
S4RSP5_PETMASmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (140 aa)
S4RW40_PETMANup214_FG domain-containing protein. (198 aa)
S4RWP9_PETMANucleoporin 50. (462 aa)
S4RXH6_PETMANucleoporin 88. (488 aa)
S4RYI9_PETMAPeptidase S59 domain-containing protein. (910 aa)
S4RZF0_PETMAHelicase ATP-binding domain-containing protein. (216 aa)
S4RZY5_PETMAGem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (266 aa)
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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