STRINGSTRING
BUB1 BUB1 RAD21 RAD21 S4R5I8_PETMA S4R5I8_PETMA CDKN2D CDKN2D S4R8K0_PETMA S4R8K0_PETMA S4R9H9_PETMA S4R9H9_PETMA CDKN2D-2 CDKN2D-2 S4RCS5_PETMA S4RCS5_PETMA RAD21-2 RAD21-2 ADCY1 ADCY1 S4RHL5_PETMA S4RHL5_PETMA CDK17 CDK17 S4RRA7_PETMA S4RRA7_PETMA PLCB1 PLCB1 PLCB1-2 PLCB1-2 S4RUA8_PETMA S4RUA8_PETMA S4R4W9_PETMA S4R4W9_PETMA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BUB1BUB1 mitotic checkpoint serine/threonine kinase. (1077 aa)
RAD21RAD21 cohesin complex component. (662 aa)
S4R5I8_PETMASpermatogenesis associated 4. (242 aa)
CDKN2DCyclin dependent kinase inhibitor 2D. (128 aa)
S4R8K0_PETMACyclin A1; Belongs to the cyclin family. (281 aa)
S4R9H9_PETMAPiwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family. (775 aa)
CDKN2D-2Cyclin dependent kinase inhibitor 2D. (141 aa)
S4RCS5_PETMACyclin-dependent kinase 4; Belongs to the protein kinase superfamily. (328 aa)
RAD21-2RAD21 cohesin complex component. (413 aa)
ADCY1Adenylate cyclase 1; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (886 aa)
S4RHL5_PETMAKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (713 aa)
CDK17Protein kinase domain-containing protein. (241 aa)
S4RRA7_PETMASpermatogenesis associated 17. (282 aa)
PLCB1Phosphoinositide phospholipase C. (985 aa)
PLCB1-21-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1167 aa)
S4RUA8_PETMASpermatogenesis associated 20. (420 aa)
S4R4W9_PETMACyclin B2; Belongs to the cyclin family. (396 aa)
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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