STRINGSTRING
S4S0J8_PETMA S4S0J8_PETMA RAD21 RAD21 S4R8I1_PETMA S4R8I1_PETMA S4RAY6_PETMA S4RAY6_PETMA RAD21-2 RAD21-2 S4RH82_PETMA S4RH82_PETMA S4RJF0_PETMA S4RJF0_PETMA S4RJL9_PETMA S4RJL9_PETMA H3F3A H3F3A SMARCB1 SMARCB1 S4RTE3_PETMA S4RTE3_PETMA S4RWT0_PETMA S4RWT0_PETMA S4S0J0_PETMA S4S0J0_PETMA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
S4S0J8_PETMAHistone H3; Belongs to the histone H3 family. (136 aa)
RAD21RAD21 cohesin complex component. (662 aa)
S4R8I1_PETMASWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (414 aa)
S4RAY6_PETMAHistone H3; Belongs to the histone H3 family. (137 aa)
RAD21-2RAD21 cohesin complex component. (413 aa)
S4RH82_PETMASWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (462 aa)
S4RJF0_PETMAAT rich interactive domain 1B (SWI1-like). (1669 aa)
S4RJL9_PETMAHistone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1025 aa)
H3F3AHistone H3; Belongs to the histone H3 family. (136 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (376 aa)
S4RTE3_PETMAHistone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (905 aa)
S4RWT0_PETMAHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (411 aa)
S4S0J0_PETMAHistone H3; Belongs to the histone H3 family. (136 aa)
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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