31 items (Leersia perrieri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9V1N1	Uncharacterized protein. (337 aa)
	A0A0D9V6X8	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (229 aa)
	A0A0D9V9B9	Uncharacterized protein. (424 aa)
	A0A0D9VAG8	RRP7 domain-containing protein. (376 aa)
	A0A0D9VEZ8	Uncharacterized protein. (281 aa)
	A0A0D9VKL1	Fcf2 domain-containing protein. (194 aa)
	A0A0D9VKR8	Uncharacterized protein. (1285 aa)
	A0A0D9VPM7	WD_REPEATS_REGION domain-containing protein. (927 aa)
	A0A0D9VTN8	Bms1-type G domain-containing protein. (1159 aa)
	A0A0D9VTV7	Uncharacterized protein. (924 aa)
	A0A0D9VW28	Uncharacterized protein. (945 aa)
	A0A0D9VYP0	Uncharacterized protein. (809 aa)
	A0A0D9W119	Uncharacterized protein. (353 aa)
	A0A0D9W7V0	BP28CT domain-containing protein. (2082 aa)
	A0A0D9W8P4	CBF domain-containing protein. (581 aa)
	A0A0D9W8U4	WD_REPEATS_REGION domain-containing protein. (868 aa)
	A0A0D9WAR5	S4 RNA-binding domain-containing protein. (182 aa)
	A0A0D9WCB7	KH_8 domain-containing protein. (203 aa)
	A0A0D9WIS0	WD_REPEATS_REGION domain-containing protein. (896 aa)
	A0A0D9WLB0	WD_REPEATS_REGION domain-containing protein. (723 aa)
	A0A0D9WSJ7	WD_REPEATS_REGION domain-containing protein. (747 aa)
	A0A0D9WUM8	Uncharacterized protein. (706 aa)
	A0A0D9WWN0	Uncharacterized protein. (1881 aa)
	A0A0D9WWW2	WD_REPEATS_REGION domain-containing protein. (536 aa)
	A0A0D9X178	WD_REPEATS_REGION domain-containing protein. (541 aa)
	A0A0D9X4J6	Brix domain-containing protein. (293 aa)
	A0A0D9X7V6	PINc domain-containing protein. (199 aa)
	A0A0D9XWE8	Uncharacterized protein. (102 aa)
	A0A0D9XX80	Uncharacterized protein. (1077 aa)
	A0A0D9Y1A6	WD_REPEATS_REGION domain-containing protein. (798 aa)
	A0A0D9Y1S5	Utp12 domain-containing protein. (250 aa)

Your Current Organism:

Leersia perrieri

NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9V1N1	A0A0D9V6X8	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.995
A0A0D9V1N1	A0A0D9V9B9	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A0D9V1N1	A0A0D9VAG8	Uncharacterized protein.	RRP7 domain-containing protein.	0.970
A0A0D9V1N1	A0A0D9VEZ8	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A0D9V1N1	A0A0D9VKL1	Uncharacterized protein.	Fcf2 domain-containing protein.	0.992
A0A0D9V1N1	A0A0D9VKR8	Uncharacterized protein.	Uncharacterized protein.	0.963
A0A0D9V1N1	A0A0D9VPM7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A0D9V1N1	A0A0D9VTN8	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.996
A0A0D9V1N1	A0A0D9VTV7	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A0D9V1N1	A0A0D9VW28	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A0D9V1N1	A0A0D9VYP0	Uncharacterized protein.	Uncharacterized protein.	0.982
A0A0D9V1N1	A0A0D9W119	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A0D9V1N1	A0A0D9W7V0	Uncharacterized protein.	BP28CT domain-containing protein.	0.989
A0A0D9V1N1	A0A0D9W8P4	Uncharacterized protein.	CBF domain-containing protein.	0.982
A0A0D9V1N1	A0A0D9W8U4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993
A0A0D9V1N1	A0A0D9WAR5	Uncharacterized protein.	S4 RNA-binding domain-containing protein.	0.981
A0A0D9V1N1	A0A0D9WCB7	Uncharacterized protein.	KH_8 domain-containing protein.	0.978
A0A0D9V1N1	A0A0D9WIS0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.990
A0A0D9V1N1	A0A0D9WLB0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A0D9V1N1	A0A0D9WSJ7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993