60 items (Leersia perrieri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9XX80	Uncharacterized protein. (1077 aa)
	A0A0D9XX60	Uncharacterized protein. (651 aa)
	A0A0D9XVV4	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (237 aa)
	A0A0D9XVU8	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (234 aa)
	A0A0D9XRF1	Bms1-type G domain-containing protein. (781 aa)
	A0A0D9XR43	Uncharacterized protein. (312 aa)
	A0A0D9VFU2	Uncharacterized protein. (307 aa)
	A0A0D9WUM8	Uncharacterized protein. (706 aa)
	A0A0D9WTK3	C2H2-type domain-containing protein. (400 aa)
	A0A0D9WSJ7	WD_REPEATS_REGION domain-containing protein. (747 aa)
	A0A0D9WLJ6	Brix domain-containing protein. (399 aa)
	A0A0D9WLB0	WD_REPEATS_REGION domain-containing protein. (723 aa)
	A0A0D9WJV3	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (812 aa)
	A0A0D9WIS0	WD_REPEATS_REGION domain-containing protein. (896 aa)
	A0A0D9WFQ2	Uncharacterized protein. (195 aa)
	A0A0D9WFD1	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (198 aa)
	A0A0D9WEQ1	Uncharacterized protein. (542 aa)
	A0A0D9WCB7	KH_8 domain-containing protein. (203 aa)
	A0A0D9WAR5	S4 RNA-binding domain-containing protein. (182 aa)
	A0A0D9WAL8	Uncharacterized protein. (569 aa)
	A0A0D9W8P4	CBF domain-containing protein. (581 aa)
	A0A0D9W0U1	FtsJ domain-containing protein. (236 aa)
	A0A0D9W060	Uncharacterized protein. (462 aa)
	A0A0D9VYP0	Uncharacterized protein. (809 aa)
	A0A0D9VX81	Uncharacterized protein. (223 aa)
	A0A0D9VWR4	WD_REPEATS_REGION domain-containing protein. (525 aa)
	A0A0D9VW28	Uncharacterized protein. (945 aa)
	A0A0D9XPT5	Uncharacterized protein. (232 aa)
	A0A0D9XNU5	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (552 aa)
	A0A0D9XN73	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (260 aa)
	A0A0D9XLU7	Uncharacterized protein. (63 aa)
	A0A0D9XL30	Uncharacterized protein. (755 aa)
	A0A0D9XKE4	PfkB domain-containing protein. (366 aa)
	A0A0D9XJ87	Uncharacterized protein. (790 aa)
	A0A0D9XBQ6	Uncharacterized protein. (459 aa)
	A0A0D9XB15	Uncharacterized protein; Belongs to the carbohydrate kinase PfkB family. (403 aa)
	A0A0D9X7V6	PINc domain-containing protein. (199 aa)
	A0A0D9X2R9	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	A0A0D9X1W6	Uncharacterized protein. (333 aa)
	A0A0D9X178	WD_REPEATS_REGION domain-containing protein. (541 aa)
	A0A0D9WXJ8	Ribosomal_L28e domain-containing protein. (134 aa)
	A0A0D9VUG9	Uncharacterized protein. (487 aa)
	A0A0D9VFF4	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (192 aa)
	A0A0D9VEZ8	Uncharacterized protein. (281 aa)
	A0A0D9WXJ2	Protein MAK16 homolog; Belongs to the MAK16 family. (283 aa)
	A0A0D9WWN0	Uncharacterized protein. (1881 aa)
	A0A0D9WWM9	Uncharacterized protein. (67 aa)
	A0A0D9WWI9	Uncharacterized protein. (126 aa)
	A0A0D9VT01	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (192 aa)
	A0A0D9VPM7	WD_REPEATS_REGION domain-containing protein. (927 aa)
	A0A0D9VKJ1	Uncharacterized protein. (64 aa)
	A0A0D9VBA9	Uncharacterized protein; Belongs to the NOB1 family. (596 aa)
	A0A0D9VAG8	RRP7 domain-containing protein. (376 aa)
	A0A0D9V8R9	RIO domain-containing protein. (521 aa)
	A0A0D9V6X8	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (229 aa)
	A0A0D9V4W2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (391 aa)
	A0A0D9UZ75	Sas10 domain-containing protein. (705 aa)
	A0A0D9XWN3	Uncharacterized protein. (504 aa)
	A0A0D9XWE8	Uncharacterized protein. (102 aa)
	A0A0D9XY72	Uncharacterized protein. (163 aa)

Your Current Organism:

Leersia perrieri

NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9UZ75	A0A0D9V4W2	Sas10 domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.997
A0A0D9UZ75	A0A0D9V6X8	Sas10 domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
A0A0D9UZ75	A0A0D9V8R9	Sas10 domain-containing protein.	RIO domain-containing protein.	0.749
A0A0D9UZ75	A0A0D9VAG8	Sas10 domain-containing protein.	RRP7 domain-containing protein.	0.992
A0A0D9UZ75	A0A0D9VBA9	Sas10 domain-containing protein.	Uncharacterized protein; Belongs to the NOB1 family.	0.994
A0A0D9UZ75	A0A0D9VEZ8	Sas10 domain-containing protein.	Uncharacterized protein.	0.999
A0A0D9UZ75	A0A0D9VFF4	Sas10 domain-containing protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.962
A0A0D9UZ75	A0A0D9VFU2	Sas10 domain-containing protein.	Uncharacterized protein.	0.955
A0A0D9UZ75	A0A0D9VKJ1	Sas10 domain-containing protein.	Uncharacterized protein.	0.992
A0A0D9UZ75	A0A0D9VPM7	Sas10 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.997
A0A0D9UZ75	A0A0D9VT01	Sas10 domain-containing protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.962
A0A0D9UZ75	A0A0D9VUG9	Sas10 domain-containing protein.	Uncharacterized protein.	0.894
A0A0D9UZ75	A0A0D9VW28	Sas10 domain-containing protein.	Uncharacterized protein.	0.999
A0A0D9UZ75	A0A0D9VWR4	Sas10 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A0D9UZ75	A0A0D9VYP0	Sas10 domain-containing protein.	Uncharacterized protein.	0.995
A0A0D9UZ75	A0A0D9W060	Sas10 domain-containing protein.	Uncharacterized protein.	0.745
A0A0D9UZ75	A0A0D9W0U1	Sas10 domain-containing protein.	FtsJ domain-containing protein.	0.901
A0A0D9UZ75	A0A0D9W8P4	Sas10 domain-containing protein.	CBF domain-containing protein.	0.999
A0A0D9UZ75	A0A0D9WAL8	Sas10 domain-containing protein.	Uncharacterized protein.	0.899
A0A0D9UZ75	A0A0D9WAR5	Sas10 domain-containing protein.	S4 RNA-binding domain-containing protein.	0.997