86 items (Leersia perrieri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9VYU9	Uncharacterized protein. (1826 aa)
	A0A0D9VYJ1	Uncharacterized protein. (655 aa)
	A0A0D9VY15	Uncharacterized protein; Belongs to the DEAD box helicase family. (738 aa)
	A0A0D9VX93	Uncharacterized protein; Belongs to the DEAD box helicase family. (478 aa)
	A0A0D9VVX7	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1361 aa)
	A0A0D9VTB4	Uncharacterized protein. (718 aa)
	A0A0D9VT82	Uncharacterized protein; Belongs to the DEAD box helicase family. (769 aa)
	A0A0D9VR63	Uncharacterized protein. (2032 aa)
	A0A0D9VPR8	Uncharacterized protein. (508 aa)
	A0A0D9UW48	Uncharacterized protein. (1190 aa)
	A0A0D9UX41	RNA helicase. (647 aa)
	A0A0D9UXC5	Uncharacterized protein; Belongs to the DEAD box helicase family. (706 aa)
	A0A0D9UXM3	Uncharacterized protein. (622 aa)
	A0A0D9UXX3	Uncharacterized protein; Belongs to the DEAD box helicase family. (532 aa)
	A0A0D9UZ79	Uncharacterized protein. (1116 aa)
	A0A0D9V1W1	Uncharacterized protein. (808 aa)
	A0A0D9V1W4	Uncharacterized protein. (823 aa)
	A0A0D9V2Z1	Uncharacterized protein; Belongs to the DEAD box helicase family. (592 aa)
	A0A0D9V2Z4	Uncharacterized protein; Belongs to the DEAD box helicase family. (538 aa)
	A0A0D9V3C7	Uncharacterized protein; Belongs to the DEAD box helicase family. (406 aa)
	A0A0D9V649	Uncharacterized protein. (1333 aa)
	A0A0D9V9C0	Uncharacterized protein; Belongs to the DEAD box helicase family. (575 aa)
	A0A0D9VAT6	Uncharacterized protein. (443 aa)
	A0A0D9VB63	Uncharacterized protein. (2177 aa)
	A0A0D9VB94	Uncharacterized protein. (925 aa)
	A0A0D9VC96	Uncharacterized protein. (631 aa)
	A0A0D9VCG0	Uncharacterized protein. (1524 aa)
	A0A0D9VDH0	Uncharacterized protein. (534 aa)
	A0A0D9VF49	Uncharacterized protein. (1239 aa)
	A0A0D9VIC8	Uncharacterized protein. (1126 aa)
	A0A0D9VIQ2	Uncharacterized protein. (573 aa)
	A0A0D9VIT6	Uncharacterized protein; Belongs to the DEAD box helicase family. (508 aa)
	A0A0D9VKT2	Uncharacterized protein. (1178 aa)
	A0A0D9VLU2	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (729 aa)
	A0A0D9VM52	Uncharacterized protein. (523 aa)
	A0A0D9VMX3	Uncharacterized protein. (821 aa)
	A0A0D9VNG2	Uncharacterized protein. (643 aa)
	A0A0D9XWX0	DEAD domain-containing protein. (538 aa)
	A0A0D9XYG8	Uncharacterized protein. (956 aa)
	A0A0D9XYP7	Uncharacterized protein. (2038 aa)
	A0A0D9XZB7	Uncharacterized protein; Belongs to the DEAD box helicase family. (799 aa)
	A0A0D9Y1C1	Uncharacterized protein. (500 aa)
	A0A0D9W720	Uncharacterized protein; Belongs to the DEAD box helicase family. (783 aa)
	A0A0D9W711	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1533 aa)
	A0A0D9W6F4	Helicase ATP-binding domain-containing protein. (889 aa)
	A0A0D9W543	Uncharacterized protein. (2444 aa)
	A0A0D9W527	Uncharacterized protein. (1384 aa)
	A0A0D9W0Y1	Uncharacterized protein. (771 aa)
	A0A0D9W0C2	Uncharacterized protein. (636 aa)
	A0A0D9W7I7	Uncharacterized protein; Belongs to the DEAD box helicase family. (499 aa)
	A0A0D9WBP0	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (705 aa)
	A0A0D9WBY3	Uncharacterized protein; Belongs to the DEAD box helicase family. (597 aa)
	A0A0D9WCW8	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (866 aa)
	A0A0D9WG40	Uncharacterized protein. (1071 aa)
	A0A0D9WQD8	Uncharacterized protein. (1073 aa)
	A0A0D9WQT8	Uncharacterized protein. (959 aa)
	A0A0D9WQX8	RNA helicase. (324 aa)
	A0A0D9WRU7	Uncharacterized protein; Belongs to the DEAD box helicase family. (596 aa)
	A0A0D9WTS3	Uncharacterized protein. (234 aa)
	A0A0D9WUX3	Uncharacterized protein. (500 aa)
	A0A0D9WVE3	Uncharacterized protein. (601 aa)
	A0A0D9WWM0	Uncharacterized protein. (514 aa)
	A0A0D9WXV3	Uncharacterized protein; Belongs to the DEAD box helicase family. (533 aa)
	A0A0D9WZA3	Uncharacterized protein. (1420 aa)
	A0A0D9WZH1	Uncharacterized protein. (548 aa)
	A0A0D9X1A6	Uncharacterized protein. (990 aa)
	A0A0D9X1V7	Uncharacterized protein; Belongs to the DEAD box helicase family. (501 aa)
	A0A0D9X287	Uncharacterized protein. (541 aa)
	A0A0D9X2G9	Uncharacterized protein. (441 aa)
	A0A0D9X300	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (897 aa)
	A0A0D9X4N0	Uncharacterized protein. (1044 aa)
	A0A0D9X7T9	DEAD-box ATP-dependent RNA helicase 29. (850 aa)
	A0A0D9XDC0	Uncharacterized protein. (558 aa)
	A0A0D9XFS4	Uncharacterized protein; Belongs to the DEAD box helicase family. (701 aa)
	A0A0D9XKH5	Uncharacterized protein. (1041 aa)
	A0A0D9XKU6	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1565 aa)
	A0A0D9XL94	Uncharacterized protein; Belongs to the DEAD box helicase family. (526 aa)
	A0A0D9XPM3	Uncharacterized protein. (1001 aa)
	A0A0D9XR96	Uncharacterized protein. (734 aa)
	A0A0D9XSP3	Helicase ATP-binding domain-containing protein. (726 aa)
	A0A0D9XTV0	Uncharacterized protein. (701 aa)
	A0A0D9XV85	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (611 aa)
	A0A0D9XVH0	Uncharacterized protein. (1387 aa)
	A0A0D9VK37	Uncharacterized protein. (954 aa)
	A0A0D9W0A1	RNA helicase. (604 aa)
	A0A0D9VZ08	Uncharacterized protein. (1156 aa)

Your Current Organism:

Leersia perrieri

NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9UW48	A0A0D9UX41	Uncharacterized protein.	RNA helicase.	0.467
A0A0D9UW48	A0A0D9UXC5	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.447
A0A0D9UW48	A0A0D9UXM3	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A0D9UW48	A0A0D9UXX3	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.447
A0A0D9UW48	A0A0D9V1W1	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A0D9UW48	A0A0D9V1W4	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A0D9UW48	A0A0D9V2Z1	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.439
A0A0D9UW48	A0A0D9V2Z4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.439
A0A0D9UW48	A0A0D9V3C7	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.460
A0A0D9UW48	A0A0D9V649	Uncharacterized protein.	Uncharacterized protein.	0.942
A0A0D9UW48	A0A0D9V9C0	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.447
A0A0D9UW48	A0A0D9VAT6	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A0D9UW48	A0A0D9VB63	Uncharacterized protein.	Uncharacterized protein.	0.450
A0A0D9UW48	A0A0D9VC96	Uncharacterized protein.	Uncharacterized protein.	0.653
A0A0D9UW48	A0A0D9VCG0	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A0D9UW48	A0A0D9VIC8	Uncharacterized protein.	Uncharacterized protein.	0.466
A0A0D9UW48	A0A0D9VIQ2	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A0D9UW48	A0A0D9VIT6	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.457
A0A0D9UW48	A0A0D9VK37	Uncharacterized protein.	Uncharacterized protein.	0.558
A0A0D9UW48	A0A0D9VKT2	Uncharacterized protein.	Uncharacterized protein.	0.584