83 items (Leersia perrieri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9UZB4	Uncharacterized protein. (103 aa)
	A0A0D9UVW6	HDAC_interact domain-containing protein. (1426 aa)
	A0A0D9UVW7	Uncharacterized protein. (252 aa)
	A0A0D9UWT3	Uncharacterized protein. (437 aa)
	A0A0D9UZB3	Uncharacterized protein. (120 aa)
	A0A0D9V032	Uncharacterized protein. (520 aa)
	A0A0D9V0A0	Uncharacterized protein. (457 aa)
	A0A0D9V1L7	Uncharacterized protein. (601 aa)
	A0A0D9V226	Uncharacterized protein. (462 aa)
	A0A0D9V2U1	Uncharacterized protein. (170 aa)
	A0A0D9V369	Uncharacterized protein. (79 aa)
	A0A0D9V6K6	Uncharacterized protein. (237 aa)
	A0A0D9VBD0	Uncharacterized protein. (445 aa)
	A0A0D9VCF8	Thioredoxin domain-containing protein. (444 aa)
	A0A0D9Y1R4	Uncharacterized protein. (77 aa)
	A0A0D9Y023	Uncharacterized protein. (451 aa)
	A0A0D9XZT0	Uncharacterized protein. (815 aa)
	A0A0D9XZB5	Uncharacterized protein. (454 aa)
	A0A0D9XZB4	Uncharacterized protein. (333 aa)
	A0A0D9XZB1	Uncharacterized protein. (448 aa)
	A0A0D9XYK0	DUF862 domain-containing protein. (137 aa)
	A0A0D9XV50	Uncharacterized protein. (448 aa)
	A0A0D9XSS4	Uncharacterized protein. (483 aa)
	A0A0D9XSS1	Uncharacterized protein. (1199 aa)
	A0A0D9XSR9	Uncharacterized protein. (345 aa)
	A0A0D9VHJ6	AAI domain-containing protein. (201 aa)
	A0A0D9VJ21	DUF862 domain-containing protein. (207 aa)
	A0A0D9VM13	Uncharacterized protein. (76 aa)
	A0A0D9VMJ2	DUF862 domain-containing protein. (262 aa)
	A0A0D9VN79	DUF862 domain-containing protein. (238 aa)
	A0A0D9VQA4	Uncharacterized protein. (260 aa)
	A0A0D9VQT0	DUF862 domain-containing protein. (247 aa)
	A0A0D9VQU3	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (360 aa)
	A0A0D9VT96	Uncharacterized protein. (426 aa)
	A0A0D9VUV4	Uncharacterized protein. (331 aa)
	A0A0D9VWB5	LisH domain-containing protein. (213 aa)
	A0A0D9VY97	Uncharacterized protein. (286 aa)
	A0A0D9VZJ1	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family. (101 aa)
	A0A0D9W299	Uncharacterized protein. (195 aa)
	A0A0D9W3G2	Uncharacterized protein. (482 aa)
	A0A0D9W6R1	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. (77 aa)
	A0A0D9W6W3	Uncharacterized protein. (560 aa)
	A0A0D9W8V6	Uncharacterized protein. (555 aa)
	A0A0D9WAB4	Uncharacterized protein. (401 aa)
	A0A0D9WBN5	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (112 aa)
	A0A0D9WBP3	HDAC_interact domain-containing protein. (1362 aa)
	A0A0D9WCD2	Uncharacterized protein. (561 aa)
	A0A0D9WCD3	Uncharacterized protein. (526 aa)
	A0A0D9WDP0	Uncharacterized protein. (591 aa)
	A0A0D9WDP2	Uncharacterized protein. (486 aa)
	A0A0D9WGN2	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (113 aa)
	A0A0D9WGV7	Uncharacterized protein. (408 aa)
	A0A0D9WHH6	Uncharacterized protein. (501 aa)
	A0A0D9WIA8	Methyltransf_11 domain-containing protein. (214 aa)
	A0A0D9WIS2	Uncharacterized protein. (311 aa)
	A0A0D9WJZ3	Uncharacterized protein. (441 aa)
	A0A0D9WKF9	HDAC_interact domain-containing protein. (787 aa)
	A0A0D9XSR8	Uncharacterized protein. (108 aa)
	A0A0D9XSR7	Uncharacterized protein. (418 aa)
	A0A0D9XQK4	Uncharacterized protein. (180 aa)
	A0A0D9XLV2	DUF862 domain-containing protein. (243 aa)
	A0A0D9XKH9	DUF862 domain-containing protein. (307 aa)
	A0A0D9XJB3	Uncharacterized protein. (389 aa)
	A0A0D9XD32	Uncharacterized protein. (397 aa)
	A0A0D9XBQ1	Uncharacterized protein. (549 aa)
	A0A0D9X825	Uncharacterized protein. (1467 aa)
	A0A0D9X7N2	Uncharacterized protein. (64 aa)
	A0A0D9X6X0	Uncharacterized protein. (99 aa)
	A0A0D9X6W8	Uncharacterized protein. (99 aa)
	A0A0D9X6U8	Uncharacterized protein. (468 aa)
	A0A0D9X6U7	Uncharacterized protein. (461 aa)
	A0A0D9X2S8	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (545 aa)
	A0A0D9X1L7	Uncharacterized protein. (165 aa)
	A0A0D9WXW7	WD_REPEATS_REGION domain-containing protein. (114 aa)
	A0A0D9WT56	Uncharacterized protein. (85 aa)
	A0A0D9WRV5	Uncharacterized protein. (288 aa)
	A0A0D9WR88	DUF862 domain-containing protein. (209 aa)
	A0A0D9WQ06	Uncharacterized protein. (79 aa)
	A0A0D9WPJ2	Uncharacterized protein. (89 aa)
	A0A0D9WPJ1	Uncharacterized protein. (194 aa)
	A0A0D9WML3	DUF862 domain-containing protein. (266 aa)
	A0A0D9WLN6	Uncharacterized protein. (159 aa)
	A0A0D9WKW1	DUF862 domain-containing protein. (269 aa)

Your Current Organism:

Leersia perrieri

NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9UVW6	A0A0D9VWB5	HDAC_interact domain-containing protein.	LisH domain-containing protein.	0.566
A0A0D9UVW6	A0A0D9W8V6	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.566
A0A0D9UVW6	A0A0D9WXW7	HDAC_interact domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.566
A0A0D9UVW6	A0A0D9X2S8	HDAC_interact domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.662
A0A0D9UVW7	A0A0D9VWB5	Uncharacterized protein.	LisH domain-containing protein.	0.566
A0A0D9UVW7	A0A0D9W8V6	Uncharacterized protein.	Uncharacterized protein.	0.566
A0A0D9UVW7	A0A0D9WXW7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.566
A0A0D9UVW7	A0A0D9X2S8	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.662
A0A0D9UWT3	A0A0D9UZB3	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A0D9UWT3	A0A0D9V369	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A0D9UWT3	A0A0D9Y1R4	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A0D9UZB3	A0A0D9UWT3	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A0D9UZB3	A0A0D9V032	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A0D9UZB3	A0A0D9V369	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A0D9UZB3	A0A0D9WCD2	Uncharacterized protein.	Uncharacterized protein.	0.435
A0A0D9UZB3	A0A0D9WPJ1	Uncharacterized protein.	Uncharacterized protein.	0.492
A0A0D9UZB3	A0A0D9WPJ2	Uncharacterized protein.	Uncharacterized protein.	0.476
A0A0D9UZB3	A0A0D9X6U7	Uncharacterized protein.	Uncharacterized protein.	0.485
A0A0D9UZB3	A0A0D9X6U8	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A0D9UZB3	A0A0D9XSR7	Uncharacterized protein.	Uncharacterized protein.	0.518