STRINGSTRING
Xaut_0098 Xaut_0098 Xaut_0099 Xaut_0099 Xaut_0101 Xaut_0101 Xaut_0102 Xaut_0102 Xaut_0103 Xaut_0103 Xaut_1419 Xaut_1419 Xaut_1755 Xaut_1755 Xaut_2010 Xaut_2010 gloB gloB Xaut_2020 Xaut_2020 Xaut_2610 Xaut_2610 Xaut_4040 Xaut_4040 Xaut_4041 Xaut_4041 Xaut_4042 Xaut_4042 Xaut_4172 Xaut_4172
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Xaut_0098KEGG: bra:BRADO5430 hypothetical protein. (105 aa)
Xaut_0099Hypothetical protein. (83 aa)
Xaut_0101KEGG: bbt:BBta_5913 hypothetical protein. (153 aa)
Xaut_0102PFAM: amine oxidase; KEGG: bbt:BBta_2164 putative amine oxidase. (547 aa)
Xaut_0103PFAM: Rieske [2Fe-2S] domain protein; KEGG: bra:BRADO5427 hypothetical protein. (153 aa)
Xaut_1419PFAM: amine oxidase; KEGG: bbt:BBta_0261 hypothetical protein. (419 aa)
Xaut_1755PFAM: beta-lactamase domain protein; KEGG: eba:ebA2717 putative metallo-beta-lactamase family protein. (235 aa)
Xaut_2010TIGRFAM: Alcohol dehydrogenase zinc-binding type 2; PFAM: oxidoreductase domain protein; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bov:BOV_1026 alcohol dehydrogenase, zinc-containing. (327 aa)
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (282 aa)
Xaut_2020PFAM: protein of unknown function DUF985; KEGG: rpc:RPC_0507 protein of unknown function DUF985. (154 aa)
Xaut_2610PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc03929 putative zinc-type alcohol dehydrogenase transmembrane protein. (375 aa)
Xaut_4040PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: acr:Acry_2976 alcohol dehydrogenase, zinc-binding domain protein. (356 aa)
Xaut_4041Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (116 aa)
Xaut_4042PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pde:Pden_4982 short-chain dehydrogenase/reductase SDR. (261 aa)
Xaut_4172PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rru:Rru_A2466 glyoxalase/bleomycin resistance protein/dioxygenase. (140 aa)
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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