STRINGSTRING
Xaut_0952 Xaut_0952 Xaut_0953 Xaut_0953 Xaut_0957 Xaut_0957 Xaut_0958 Xaut_0958 Xaut_0959 Xaut_0959 Xaut_1087 Xaut_1087 Xaut_1629 Xaut_1629 Xaut_1630 Xaut_1630 Xaut_1716 Xaut_1716 Xaut_1717 Xaut_1717 Xaut_1718 Xaut_1718 Xaut_2777 Xaut_2777
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Xaut_0952RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ret:RHE_PF00056 putative RNA polymerase sigma factor protein, ECF family. (179 aa)
Xaut_0953PFAM: protein of unknown function DUF1109; KEGG: rle:RL3021 putative transmembrane protein. (226 aa)
Xaut_0957PFAM: protein of unknown function DUF1109; KEGG: bja:blr4929 hypothetical protein. (213 aa)
Xaut_0958RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: nha:Nham_4408 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
Xaut_0959Hypothetical protein. (92 aa)
Xaut_1087SMART: AAA ATPase; KEGG: pth:PTH_2877 hypothetical protein. (590 aa)
Xaut_1629RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rru:Rru_A0722 sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily. (230 aa)
Xaut_1630TIGRFAM: anti-sigma factor, putative, ChrR family; PFAM: Cupin 2 conserved barrel domain protein; KEGG: mlo:mlr8089 transcriptional regulator. (235 aa)
Xaut_1716KEGG: rpd:RPD_0970 hypothetical protein. (260 aa)
Xaut_1717RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rpd:RPD_0971 sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa)
Xaut_1718KEGG: rpd:RPD_0972 hypothetical protein. (242 aa)
Xaut_2777RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rsh:Rsph17029_3603 RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.