STRINGSTRING
Xaut_2874 Xaut_2874 Xaut_4596 Xaut_4596 Xaut_4524 Xaut_4524 Xaut_4009 Xaut_4009 Xaut_4003 Xaut_4003 Xaut_3735 Xaut_3735 Xaut_3734 Xaut_3734 Xaut_3637 Xaut_3637 Xaut_3471 Xaut_3471 Xaut_3039 Xaut_3039 Xaut_3008 Xaut_3008 Xaut_2709 Xaut_2709 Xaut_2678 Xaut_2678 Xaut_2677 Xaut_2677 Xaut_2657 Xaut_2657 Xaut_2385 Xaut_2385 Xaut_2285 Xaut_2285 Xaut_2252 Xaut_2252 xerC-2 xerC-2 Xaut_1610 Xaut_1610 Xaut_1609 Xaut_1609 Xaut_1093 Xaut_1093 Xaut_1065 Xaut_1065 Xaut_0753 Xaut_0753 Xaut_0703 Xaut_0703 Xaut_0587 Xaut_0587 Xaut_0499 Xaut_0499 Xaut_0268 Xaut_0268 Xaut_0250 Xaut_0250 Xaut_0249 Xaut_0249 Xaut_0220 Xaut_0220 Xaut_0215 Xaut_0215 xerC xerC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Xaut_2874PFAM: transposase IS116/IS110/IS902 family protein; KEGG: mlo:mlr6190 transposase. (362 aa)
Xaut_4596PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL70042 putative insertion sequence protein. (146 aa)
Xaut_4524PFAM: B transposition protein domain protein; KEGG: ecs:ECs4946 putative DNA transposition protein. (319 aa)
Xaut_4009PFAM: transposase IS116/IS110/IS902 family protein; KEGG: mlo:mlr6190 transposase. (362 aa)
Xaut_4003PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bja:bll1545 putative transposase. (340 aa)
Xaut_3735PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL110144 putative transposon/insertion element protein. (107 aa)
Xaut_3734PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bja:bll1545 putative transposase. (340 aa)
Xaut_3637TIGRFAM: phage head-tail adaptor, putative; KEGG: reu:Reut_A2398 putative bacteriophage protein. (123 aa)
Xaut_3471PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL110144 putative transposon/insertion element protein. (88 aa)
Xaut_3039PFAM: transposase IS4 family protein; KEGG: psb:Psyr_0095 transposase, IS4. (473 aa)
Xaut_3008PFAM: transposase IS116/IS110/IS902 family protein; KEGG: mlo:mlr6190 transposase. (362 aa)
Xaut_2709KEGG: bbt:BBta_0480 putative transposase. (130 aa)
Xaut_2678KEGG: nwi:Nwi_2412 ISBm1, transposase orfA. (132 aa)
Xaut_2677PFAM: transposase IS4 family protein; KEGG: nwi:Nwi_1095 transposase, IS4. (142 aa)
Xaut_2657PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: nha:Nham_4139 transposase IS116/IS110/IS902. (350 aa)
Xaut_2385PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr2053 putative transposase. (70 aa)
Xaut_2285PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mlo:mll9195 transposase. (370 aa)
Xaut_2252PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL120646 putative transposase-related protein. (131 aa)
xerC-2Integrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (354 aa)
Xaut_1610PFAM: transposase IS3/IS911 family protein; KEGG: mag:amb3265 insertion element ISR1 hypothetical 10 kDa protein A3. (97 aa)
Xaut_1609PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL110144 putative transposon/insertion element protein. (88 aa)
Xaut_1093PFAM: transposase IS3/IS911 family protein; KEGG: mag:amb3265 insertion element ISR1 hypothetical 10 kDa protein A3. (84 aa)
Xaut_1065PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL110144 putative transposon/insertion element protein. (88 aa)
Xaut_0753PFAM: transposase IS116/IS110/IS902 family protein; KEGG: mlo:mlr6190 transposase. (362 aa)
Xaut_0703PFAM: transposase IS116/IS110/IS902 family protein; KEGG: mlo:mlr6190 transposase. (362 aa)
Xaut_0587PFAM: transposase IS116/IS110/IS902 family protein; KEGG: mlo:mlr6190 transposase. (362 aa)
Xaut_0499PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mlo:mll9195 transposase. (370 aa)
Xaut_0268PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: nha:Nham_4139 transposase IS116/IS110/IS902. (350 aa)
Xaut_0250PFAM: transposase IS4 family protein; KEGG: nwi:Nwi_1095 transposase, IS4. (142 aa)
Xaut_0249KEGG: nwi:Nwi_2412 ISBm1, transposase orfA. (132 aa)
Xaut_0220PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL110144 putative transposon/insertion element protein. (88 aa)
Xaut_0215PFAM: integrase family protein; KEGG: rsp:RSP_2361 putative integrase/resolvase recombinase protein phage-related integrase; Belongs to the 'phage' integrase family. (550 aa)
xerCIntegrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (342 aa)
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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