STRINGSTRING
Xaut_0496 Xaut_0496 Xaut_2484 Xaut_2484 Xaut_2447 Xaut_2447 Xaut_3843 Xaut_3843 Xaut_3786 Xaut_3786
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Xaut_0496KEGG: rpb:RPB_0080 hypothetical protein. (289 aa)
Xaut_2484KEGG: xft:PD0791 hypothetical protein. (328 aa)
Xaut_2447KEGG: nha:Nham_1256 hypothetical protein. (261 aa)
Xaut_3843PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: nwi:Nwi_0745 HNH endonuclease. (196 aa)
Xaut_3786PFAM: beta-lactamase domain protein; KEGG: mes:Meso_1362 beta-lactamase-like; Belongs to the UPF0173 family. (243 aa)
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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