STRINGSTRING
Xaut_0011 Xaut_0011 Xaut_1714 Xaut_1714
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Xaut_0011PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: vei:Veis_1883 iron-containing alcohol dehydrogenase. (381 aa)
Xaut_1714PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: vei:Veis_0902 iron-containing alcohol dehydrogenase. (362 aa)
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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