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| | ahcY | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (465 aa) |
| | Xaut_4771 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_3417 peptidase S1C, Do; Belongs to the peptidase S1C family. (496 aa) |
| | Xaut_4762 | TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rde:RD1_1442 hydrolase, putative. (242 aa) |
| | Xaut_4759 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rpe:RPE_2959 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. (537 aa) |
| | Xaut_4751 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rpc:RPC_2813 single-stranded-DNA-specific exonuclease RecJ. (626 aa) |
| | Xaut_4749 | TIGRFAM: aminopeptidase N; PFAM: peptidase M61 domain protein; Peptidase M1 membrane alanine aminopeptidase; KEGG: bms:BR0617 aminopeptidase N. (876 aa) |
| | xseB | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (97 aa) |
| | Xaut_4705 | TIGRFAM: Allophanate hydrolase; PFAM: Amidase; KEGG: bbt:BBta_0724 putative glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A). (596 aa) |
| | purU | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (289 aa) |
| | rne | Ribonuclease, Rne/Rng family; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (1080 aa) |
| | Xaut_4667 | N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: rpb:RPB_3008 N-acetylmuramoyl-L-alanine amidase. (404 aa) |
| | Xaut_4656 | TIGRFAM: Amidohydrolase AtzE type; PFAM: Amidase; KEGG: rpa:RPA1469 possible glutamyl-tRNA (Gln) amidotransferase subunit A. (482 aa) |
| | Xaut_4571 | PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bbr:BB4484 putative lipase. (296 aa) |
| | Xaut_4539 | Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: rpa:RPA3150 possible D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (663 aa) |
| | clpS | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (124 aa) |
| | Xaut_4536 | TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rpe:RPE_3404 ATP-dependent Clp protease, ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. (823 aa) |
| | Xaut_4432 | TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: nwi:Nwi_1852 peptidase M50, putative membrane-associated zinc metallopeptidase. (385 aa) |
| | Xaut_4415 | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: nha:Nham_2055 DEAD/DEAH box helicase-like. (697 aa) |
| | Xaut_4411 | Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: rpa:RPA2852 putative sugar hydrolase. (337 aa) |
| | surE | Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (280 aa) |
| | lexA | SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (237 aa) |
| | Xaut_4367 | TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rpa:RPA2647 putative hydrolase. (388 aa) |
| | Xaut_4334 | PFAM: Choloylglycine hydrolase; KEGG: bpa:BPP3319 choloylglycine hydrolase. (341 aa) |
| | Xaut_4330 | TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mlo:mll0418 putative deoxyribonuclease. (273 aa) |
| | Xaut_4324 | Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rpd:RPD_2714 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (399 aa) |
| | Xaut_4321 | Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bra:BRADO6760 putative gluconolactonase (gnl). (304 aa) |
| | Xaut_4306 | TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mag:amb4254 superfamily II DNA helicase. (607 aa) |
| | queF | GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. (150 aa) |
| | Xaut_4278 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (383 aa) |
| | Xaut_4267 | TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: ajs:Ajs_3932 intracellular protease, PfpI family. (193 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1168 aa) |
| | Xaut_4244 | TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bja:bll4758 deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily. (401 aa) |
| | Xaut_4206 | PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bja:bll3830 hypothetical protein. (399 aa) |
| | hppA | V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. (713 aa) |
| | Xaut_4189 | Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. (502 aa) |
| | Xaut_4183 | PFAM: conserved hypothetical protein; KEGG: rpa:RPA2004 hypothetical protein; Belongs to the LOG family. (202 aa) |
| | ureC | TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain protein; Amidohydrolase 3; KEGG: rpc:RPC_3692 urease, alpha subunit. (570 aa) |
| | ureB | TIGRFAM: urease, beta subunit; urease, gamma subunit; PFAM: Urease beta subunit; Urease gamma subunit region; KEGG: dra:DRA0319 urease, beta/gamma subunit; Belongs to the urease beta subunit family. (206 aa) |
| | Xaut_4145 | KEGG: gbe:GbCGDNIH1_1332 hypothetical membrane-bound protease. (452 aa) |
| | purQ | Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] (232 aa) |
| | folD | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (295 aa) |
| | recA | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (361 aa) |
| | Xaut_4058 | PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bbt:BBta_2105 putative N-isopropylammelide isopropylaminohydrolase. (413 aa) |
| | Xaut_4043 | PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: sil:SPO3790 dihydrolipoamide acetyltransferase. (372 aa) |
| | vapC-2 | PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (121 aa) |
| | Xaut_3922 | Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (176 aa) |
| | Xaut_3918 | TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: nha:Nham_2283 dihydroorotase, multifunctional complex type. (438 aa) |
| | rnc | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (236 aa) |
| | Xaut_3880 | TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: nha:Nham_2252 peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family. (250 aa) |
| | rnr | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. (776 aa) |
| | Xaut_3862 | PFAM: NUDIX hydrolase; KEGG: rpb:RPB_2416 NUDIX hydrolase. (244 aa) |
| | Xaut_3843 | PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: nwi:Nwi_0745 HNH endonuclease. (196 aa) |
| | Xaut_3795 | PFAM: acylphosphatase; KEGG: rpd:RPD_3091 acylphosphatase. (96 aa) |
| | Xaut_3786 | PFAM: beta-lactamase domain protein; KEGG: mes:Meso_1362 beta-lactamase-like; Belongs to the UPF0173 family. (243 aa) |
| | Xaut_3740 | PFAM: protein of unknown function DUF159; KEGG: bbt:BBta_3432 hypothetical protein; Belongs to the SOS response-associated peptidase family. (222 aa) |
| | Xaut_3708 | TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: bov:BOV_0589 caudovirus prohead protease. (371 aa) |
| | Xaut_3681 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: mhu:Mhun_0639 exonuclease. (200 aa) |
| | Xaut_3492 | TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mes:Meso_1162 putative agmatinase; Belongs to the arginase family. (330 aa) |
| | Xaut_3516 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; Belongs to the peptidase S1C family. (537 aa) |
| | Xaut_3525 | PFAM: peptidase M16 domain protein; KEGG: rpc:RPC_4796 peptidase M16-like; Belongs to the peptidase M16 family. (421 aa) |
| | fbp2 | PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: acr:Acry_0821 inositol phosphatase/fructose-1,6-bisphosphatase. (329 aa) |
| | clpP | Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (211 aa) |
| | lon | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (805 aa) |
| | Xaut_3602 | PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; KEGG: mmr:Mmar10_0016 DNA polymerase I. (299 aa) |
| | Xaut_3658 | KEGG: bvi:Bcep1808_7729 glycoside hydrolase, family 19. (220 aa) |
| | cysQ | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. (280 aa) |
| | Xaut_3452 | PFAM: polysaccharide deacetylase; KEGG: san:gbs0842 hypothetical protein. (373 aa) |
| | Xaut_3446 | PFAM: NUDIX hydrolase; KEGG: hypothetical protein. (464 aa) |
| | uppP-2 | Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (290 aa) |
| | Xaut_3381 | 4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: bja:bll7921 ABC transporter substrate-binding protein. (560 aa) |
| | Xaut_3376 | TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; KEGG: rpa:RPA1745 N-carbamoyl-L-amino acid amidohydrolase. (422 aa) |
| | Xaut_3375 | PFAM: Ureidoglycolate hydrolase; KEGG: pde:Pden_2103 ureidoglycolate hydrolase. (171 aa) |
| | Xaut_3369 | PFAM: amidohydrolase 2; KEGG: mes:Meso_1945 amidohydrolase 2. (301 aa) |
| | Xaut_3332 | TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969; KEGG: pfo:Pfl_0911 fumarylacetoacetase. (438 aa) |
| | Xaut_3327 | MRP-like protein (ATP/GTP-binding protein); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (415 aa) |
| | mutM | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (293 aa) |
| | def-2 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (172 aa) |
| | Xaut_3300 | TIGRFAM: Double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: bbt:BBta_0090 putative helicase-exonuclease type V protein family, AddA subunit; Belongs to the helicase family. UvrD subfamily. (1167 aa) |
| | Xaut_3299 | TIGRFAM: Double-strand break repair protein AddB; KEGG: bbt:BBta_0089 putative helicase-exonuclease type V protein family, AddB subunit. (1015 aa) |
| | Xaut_3295 | TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: acr:Acry_1162 peptidase M20. (409 aa) |
| | Xaut_3291 | TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: bbt:BBta_7200 putative transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (117 aa) |
| | Xaut_3290 | PFAM: polysaccharide deacetylase; KEGG: bov:BOV_0363 hypothetical protein. (482 aa) |
| | Xaut_3289 | TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bja:bll6147 N-carbamoyl-L-amino acid amidohydrolase. (426 aa) |
| | Xaut_3262 | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bov:BOV_0062 fumarylacetoacetate hydrolase family protein. (229 aa) |
| | kdpA | Potassium-transporting ATPase, A subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. (571 aa) |
| | gph | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (232 aa) |
| | Xaut_3216 | PFAM: alpha/beta hydrolase fold; KEGG: xac:XAC0319 chloroperoxidase. (281 aa) |
| | Xaut_3209 | PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO2938 putative hydrolase. (250 aa) |
| | Xaut_3204 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: nwi:Nwi_0314 DEAD/DEAH box helicase. (559 aa) |
| | Xaut_3154 | TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: rpb:RPB_3484 peptidase U35, phage prohead HK97. (159 aa) |
| | rnd | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. (382 aa) |
| | Xaut_3097 | PFAM: alpha/beta hydrolase fold; KEGG: rpd:RPD_4103 alpha/beta hydrolase fold. (301 aa) |
| | tadA | CMP/dCMP deaminase zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (147 aa) |
| | ftsH | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (640 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (343 aa) |
| | ruvA | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (205 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (169 aa) |
| | Xaut_3055 | PFAM: inositol monophosphatase; KEGG: mlo:mlr3921 putative myo-inositol-1(or 4)-monophosphatase. (262 aa) |
| | map | Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (275 aa) |
| | Xaut_3049 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: mag:amb2073 DNA polymerase III epsilon subunit and related 3'-5' exonuclease. (298 aa) |
| | Xaut_3048 | PFAM: UvrD/REP helicase; KEGG: sat:SYN_02908 ATP-dependent DNA helicase. (608 aa) |
| | Xaut_3047 | KEGG: sat:SYN_02907 ATP-dependent endonuclease family protein. (598 aa) |
| | Xaut_3026 | KEGG: mes:Meso_3828 probably methylase/helicase. (1447 aa) |
| | Xaut_2988 | PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: swi:Swit_0196 helicase domain protein. (1167 aa) |
| | Xaut_2986 | KEGG: rpa:RPA2216 hypothetical protein. (884 aa) |
| | Xaut_2985 | PFAM: UvrD/REP helicase; KEGG: rpa:RPA2215 possible ATP-dependent exodeoxyribonuclease (subunit A); Belongs to the helicase family. UvrD subfamily. (1131 aa) |
| | Xaut_2981 | PFAM: helicase domain protein; KEGG: gme:Gmet_3058 helicase-like. (1002 aa) |
| | Xaut_2950 | PFAM: NUDIX hydrolase; KEGG: rpb:RPB_1194 NUDIX hydrolase. (226 aa) |
| | oiaT | Ribulose-bisphosphate carboxylase; Involved in catabolism of D-apiose. Catalyzes the conversion of 3-oxo-isoapionate 4-phosphate to 3-phosphoglycerate and glycolate. Belongs to the RuBisCO large chain family. (414 aa) |
| | mtnC | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family. (221 aa) |
| | Xaut_2839 | Oligopeptidase B; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: bbt:BBta_0542 putative peptidase S9A family. (698 aa) |
| | Xaut_2824 | PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: nca:Noca_3424 hypothetical protein. (361 aa) |
| | Xaut_2819 | PFAM: alpha/beta hydrolase fold; KEGG: nwi:Nwi_2951 lysophospholipase. (315 aa) |
| | Xaut_2817 | PFAM: N-formylglutamate amidohydrolase; KEGG: bbt:BBta_1390 putative N-formylglutamate amidohydrolase. (295 aa) |
| | Xaut_2741 | PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bte:BTH_I2073 chlorohydrolase family protein. (454 aa) |
| | Xaut_2723 | Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (206 aa) |
| | Xaut_2645 | TIGRFAM: outer membrane autotransporter barrel domain; PFAM: lipolytic protein G-D-S-L family; Autotransporter beta- domain protein; KEGG: xac:XAC3300 esterase. (630 aa) |
| | Xaut_2639 | PFAM: helicase domain protein; KEGG: rpe:RPE_0127 helicase domain protein. (1101 aa) |
| | Xaut_2637 | PFAM: NUDIX hydrolase; KEGG: rpc:RPC_3722 nucleoside diphosphate pyrophosphatase. (217 aa) |
| | Xaut_2627 | PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; Zinc ribbon NADH pyrophosphatase; KEGG: bra:BRADO0761 putative MutT/NUDIX hydrolase family protein; putative NADH pyrophosphatase; Belongs to the Nudix hydrolase family. (315 aa) |
| | pth | Aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (202 aa) |
| | Xaut_2593 | PFAM: cell wall hydrolase SleB; KEGG: nha:Nham_3504 cell wall hydrolase, SleB. (432 aa) |
| | Xaut_2586 | PFAM: NUDIX hydrolase; KEGG: bbt:BBta_7592 putative mutator protein MutT. (138 aa) |
| | Xaut_2582 | TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pen:PSEEN2650 N-acetylornithine deacetylase. (397 aa) |
| | Xaut_2536 | Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (211 aa) |
| | ppa | Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. (180 aa) |
| | Xaut_2489 | PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: nwi:Nwi_2241 peptidase C15, pyroglutamyl peptidase I; Belongs to the peptidase C15 family. (224 aa) |
| | Xaut_2473 | PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bov:BOV_0302 hydrolase, haloacid dehalogenase-like family. (278 aa) |
| | Xaut_2471 | PFAM: protein of unknown function DUF159; KEGG: eba:ebA145 hypothetical protein; Belongs to the SOS response-associated peptidase family. (252 aa) |
| | Xaut_2414 | Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atc:AGR_C_96 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (360 aa) |
| | Xaut_2404 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (493 aa) |
| | Xaut_2396 | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbt:BBta_1939 putative fumarylacetoacetate hydrolase. (331 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (1000 aa) |
| | Xaut_2364 | PFAM: Choloylglycine hydrolase; KEGG: ftf:FTF1234 choloylglycine hydrolase family protein. (368 aa) |
| | rnhA-2 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (151 aa) |
| | Xaut_2351 | PFAM: YdjC family protein; KEGG: nha:Nham_3190 YdjC-like protein. (282 aa) |
| | hslV | 20S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (182 aa) |
| | Xaut_2294 | PFAM: alpha/beta hydrolase fold; KEGG: pde:Pden_1042 alpha/beta hydrolase fold. (263 aa) |
| | hisH | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (215 aa) |
| | hisE | PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: bbt:BBta_0141 phosphoribosyl-ATP pyrophosphohydrolase. (108 aa) |
| | Xaut_2221 | PFAM: NUDIX hydrolase; KEGG: nwi:Nwi_2633 NUDIX hydrolase; Belongs to the Nudix hydrolase family. (146 aa) |
| | Xaut_2210 | TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: rle:RL4567 putative acyl-CoA thioesterase. (314 aa) |
| | lspA | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (177 aa) |
| | vapC | PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (141 aa) |
| | cpdA | Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. (276 aa) |
| | rppH | NUDIX hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. (172 aa) |
| | Xaut_2133 | PFAM: Patatin; KEGG: mlo:mlr3635 hypothetical protein. (410 aa) |
| | Xaut_2129 | TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; KEGG: rpe:RPE_4818 ATP-dependent helicase HrpB. (837 aa) |
| | Xaut_2128 | PFAM: thioesterase superfamily protein; KEGG: putative acyl-CoA thioester hydrolase. (132 aa) |
| | Xaut_2127 | PFAM: Choloylglycine hydrolase; KEGG: syg:sync_1125 choloylglycine hydrolase. (427 aa) |
| | dapE | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (363 aa) |
| | Xaut_2072 | TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: nwi:Nwi_0449 peptidase S41A; Belongs to the peptidase S41A family. (453 aa) |
| | Xaut_2070 | TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: rpb:RPB_1431 peptidase M3B, oligoendopeptidase-related clade 3. (634 aa) |
| | obg | GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (344 aa) |
| | Xaut_2054 | PFAM: amidohydrolase 2; KEGG: reu:Reut_B3785 amidohydrolase 2. (336 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (727 aa) |
| | Xaut_2052 | PFAM: NUDIX hydrolase; KEGG: bra:BRADO4664 conserved hypothetical protein; putative NUDIX hydrolase. (153 aa) |
| | ribA | GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. (370 aa) |
| | gloB | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (282 aa) |
| | Xaut_1988 | Peptidase M50; PFAM: CBS domain containing protein; peptidase M50; KEGG: sme:SMb20925 hypothetical protein. (373 aa) |
| | Xaut_1985 | TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rpa:RPA0368 possible pseudouridine synthases; Belongs to the pseudouridine synthase RluA family. (377 aa) |
| | Xaut_1953 | Hydrolase, HAD-superfamily, subfamily IIIA; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: rpe:RPE_1450 histidinol-phosphate phosphatase family protein. (185 aa) |
| | Xaut_1925 | Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rpa:RPA4266 possible D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein); Belongs to the peptidase S11 family. (508 aa) |
| | rnpA | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (187 aa) |
| | fbp1 | PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: sme:SMb20202 putative D-fructose-1,6-bisphosphatase protein. (371 aa) |
| | Xaut_1886 | PFAM: Patatin; KEGG: mlo:mll3840 hypothetical protein. (346 aa) |
| | Xaut_1844 | TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mes:Meso_0423 HAD-superfamily hydrolase, subfamily IIA. (300 aa) |
| | mnmE | Small GTP-binding protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (431 aa) |
| | dnaQ | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (240 aa) |
| | Xaut_1828 | Maf family protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (199 aa) |
| | rho | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (422 aa) |
| | Xaut_1822 | PFAM: peptidase M22 glycoprotease; KEGG: rpa:RPA0452 glycoprotease (M22) metalloprotease. (227 aa) |
| | ybeY | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (176 aa) |
| | uppP | Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (305 aa) |
| | Xaut_1795 | PFAM: Amidohydrolase 3; KEGG: mca:MCA2859 formylmethanofurane dehydrogenase, A subunit, putative. (549 aa) |
| | mch | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family. (329 aa) |
| | purH | TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; KEGG: rpa:RPA0028 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. (529 aa) |
| | Xaut_1730 | PFAM: acetyl-CoA hydrolase/transferase; KEGG: rru:Rru_A1927 acetyl-CoA hydrolase. (508 aa) |
| | Xaut_1722 | HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (275 aa) |
| | Xaut_1705 | PFAM: alpha/beta hydrolase fold; KEGG: bja:blr0418 putative epoxide hydrolase. (321 aa) |
| | Xaut_1661 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bbt:BBta_6094 putative serine protease do-like precursor; Belongs to the peptidase S1C family. (498 aa) |
| | Xaut_1660 | TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_3257 phosphoserine phosphatase SerB. (299 aa) |
| | Xaut_1651 | PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rpe:RPE_3733 metal dependent phosphohydrolase. (202 aa) |
| | folE | PFAM: GTP cyclohydrolase I; KEGG: bra:BRADO2984 GTP cyclohydrolase I. (242 aa) |
| | hisI | Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. (164 aa) |
| | Xaut_1647 | PFAM: Patatin; KEGG: rpd:RPD_3270 patatin. (373 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (359 aa) |
| | Xaut_1589 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rpc:RPC_0876 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (609 aa) |
| | glsA-2 | PFAM: cyclic nucleotide-binding; Sulfate transporter/antisigma-factor antagonist STAS; glutaminase; KEGG: bja:bll4798 putative glutaminase; Belongs to the glutaminase family. (613 aa) |
| | Xaut_1548 | PFAM: N-formylglutamate amidohydrolase; KEGG: bja:blr7354 hypothetical protein. (267 aa) |
| | Xaut_1519 | PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rpb:RPB_4369 twin-arginine translocation pathway signal; Belongs to the 5'-nucleotidase family. (563 aa) |
| | pxpA | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (251 aa) |
| | Xaut_1496 | PFAM: Allophanate hydrolase subunit 1; KEGG: bbt:BBta_4132 putative carboxylase. (252 aa) |
| | Xaut_1476 | PFAM: NUDIX hydrolase; KEGG: rpa:RPA1073 possible ADP-ribose phosphohydrolase; Belongs to the Nudix hydrolase family. (155 aa) |
| | Xaut_1475 | PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: nwi:Nwi_2706 metal dependent phosphohydrolase. (224 aa) |
| | Xaut_1469 | Putative phage repressor; PFAM: peptidase S24 S26A and S26B; KEGG: nwi:Nwi_0466 peptidase S24; Belongs to the peptidase S24 family. (225 aa) |
| | Xaut_1465 | PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO6677 putative hydrolase. (296 aa) |
| | pepA | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (498 aa) |
| | Xaut_1452 | PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: fal:FRAAL0539 conserved hypothetical protein, putative esterase/lipase domain. (318 aa) |
| | Xaut_1441 | Beta-lactamase; PFAM: penicillin-binding protein transpeptidase; KEGG: atc:AGR_C_1700 hypothetical protein. (279 aa) |
| | Xaut_1426 | PFAM: UvrD/REP helicase; KEGG: nwi:Nwi_2360 UvrD/REP helicase. (817 aa) |
| | Xaut_1417 | TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; KEGG: bja:bll2553 3-methyladenine-DNA glycosylase. (223 aa) |
| | Xaut_1415 | TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: rpe:RPE_4389 dihydroorotase, multifunctional complex type. (446 aa) |
| | xseA | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (496 aa) |
| | Xaut_1390 | PFAM: Patatin; KEGG: hma:rrnAC0167 putative patatin-like phospholipase. (330 aa) |
| | Xaut_1328 | PFAM: NUDIX hydrolase; KEGG: bja:bll6480 hypothetical protein. (247 aa) |
| | Xaut_1277 | PFAM: isochorismatase hydrolase; KEGG: sme:SMa1821 hypothetical protein. (217 aa) |
| | Xaut_1276 | PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6920 alpha/beta hydrolase. (330 aa) |
| | Xaut_1274 | PFAM: Amidohydrolase 3; KEGG: reu:Reut_B4849 conserved hypothetical protein PA2699. (658 aa) |
| | rnhB | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (249 aa) |
| | pgl | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (242 aa) |
| | Xaut_1194 | CMP/dCMP deaminase zinc-binding; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (147 aa) |
| | Xaut_1172 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. (355 aa) |
| | glsA | PFAM: glutaminase; KEGG: bja:bll4798 putative glutaminase; Belongs to the glutaminase family. (331 aa) |
| | lepA | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (601 aa) |
| | tsaD | Putative metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (356 aa) |
| | rnhA | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (245 aa) |
| | Xaut_1094 | PFAM: restriction endonuclease; KEGG: zmo:ZMO0028 mrr restriction system protein. (310 aa) |
| | Xaut_1088 | PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: ter:Tery_4393 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family. (494 aa) |
| | Xaut_1037 | PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_4327 alpha/beta hydrolase fold. (298 aa) |
| | Xaut_1013 | PFAM: alpha/beta hydrolase fold; KEGG: rle:RL1500 putative hydrolase. (307 aa) |
| | Xaut_1012 | PFAM: Patatin; KEGG: mxa:MXAN_4295 patatin-like phospholipase family protein. (328 aa) |
| | Xaut_1005 | Oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase; KEGG: gvi:glr2850 probable thioesterase. (278 aa) |
| | Xaut_0999 | PFAM: Patatin; KEGG: mxa:MXAN_4295 patatin-like phospholipase family protein. (334 aa) |
| | Xaut_0978 | TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bbt:BBta_1654 2-haloacid dehalogenase. (247 aa) |
| | Xaut_0956 | PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PE00174 putative alpha/beta hydrolase protein. (337 aa) |
| | Xaut_0955 | PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_0548 alpha/beta hydrolase fold-1. (309 aa) |
| | mhpC | Alpha/beta hydrolase fold; Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid. (288 aa) |
| | Xaut_0882 | Amidohydrolase 3; PFAM: D-aminoacylase domain protein; Amidohydrolase 3; KEGG: swi:Swit_1735 amidohydrolase 3. (579 aa) |
| | Xaut_0861 | PFAM: peptidase M19 renal dipeptidase; KEGG: pde:Pden_1105 peptidase M19, renal dipeptidase. (324 aa) |
| | Xaut_0856 | PFAM: isochorismatase hydrolase; KEGG: pde:Pden_4354 N-carbamoylsarcosine amidase. (236 aa) |
| | Xaut_0829 | PFAM: Patatin; KEGG: bja:bll7964 hypothetical protein. (341 aa) |
| | Xaut_0811 | PFAM: protein of unknown function DUF159; KEGG: mlo:mll7390 hypothetical protein; Belongs to the SOS response-associated peptidase family. (229 aa) |
| | Xaut_0782 | PFAM: UvrD/REP helicase; KEGG: bja:blr8088 hypothetical protein. (1107 aa) |
| | Xaut_0781 | KEGG: bja:blr8087 hypothetical protein. (886 aa) |
| | Xaut_0776 | PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: vei:Veis_3742 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1143 aa) |
| | Xaut_0720 | KEGG: pde:Pden_1533 probable methylase/helicase. (1440 aa) |
| | Xaut_0680 | PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: swi:Swit_0196 helicase domain protein. (1167 aa) |
| | Xaut_0673 | KEGG: sat:SYN_02907 ATP-dependent endonuclease family protein. (619 aa) |
| | Xaut_0672 | PFAM: UvrD/REP helicase; KEGG: sat:SYN_02908 ATP-dependent DNA helicase. (595 aa) |
| | ddpX | Peptidase M15D vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (265 aa) |
| | Xaut_0650 | PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bja:blr3349 dihydroorotase. (425 aa) |
| | def | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. Belongs to the polypeptide deformylase family. (168 aa) |
| | Xaut_0555 | PFAM: Patatin; KEGG: rpd:RPD_2292 patatin. (343 aa) |
| | Xaut_0492 | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpd:RPD_2022 5-carboxymethyl-2-hydroxymuconate delta-isomerase. (257 aa) |
| | Xaut_0408 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. (176 aa) |
| | Xaut_0349 | Nicotinamidase; PFAM: isochorismatase hydrolase; KEGG: bte:BTH_I2143 pyrazinamidase/nicotinamidase. (248 aa) |
| | Xaut_0341 | (NiFe) hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. (763 aa) |
| | lpxC | UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (311 aa) |
| | Xaut_0321 | PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pol:Bpro_3430 alpha/beta hydrolase fold-3. (276 aa) |
| | glnD | Metal dependent phosphohydrolase; KEGG: rpd:RPD_0116 protein-P-II uridylyltransferase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase HD region. (969 aa) |
| | Xaut_0281 | PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bbt:BBta_7039 leucine aminopeptidase; Belongs to the peptidase M17 family. (455 aa) |
| | Xaut_0181 | PFAM: alpha/beta hydrolase fold; KEGG: bba:Bd0283 putative carboxylesterase. (313 aa) |
| | Xaut_0180 | PFAM: alpha/beta hydrolase fold; KEGG: sus:Acid_5877 alpha/beta hydrolase fold. (831 aa) |
| | Xaut_0137 | PFAM: dienelactone hydrolase; KEGG: bra:BRADO5403 putative carboxymethylenebutenolidase(dienelactone hydrolase; DLH). (252 aa) |
| | dut | Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (158 aa) |
| | Xaut_0068 | PFAM: 3'-5' exonuclease; KEGG: rpa:RPA0046 3'-5' exonuclease. (206 aa) |
| | htpX | PFAM: peptidase M48 Ste24p; KEGG: nha:Nham_0237 peptidase M48, Ste24p; Belongs to the peptidase M48B family. (317 aa) |
| | Xaut_0015 | PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mlo:mll4974 hypothetical protein. (377 aa) |
