STRINGSTRING
BIGA_1138 BIGA_1138 BIGA_1139 BIGA_1139 BIGA_1140 BIGA_1140 BIGA_1205 BIGA_1205 BIGA_1206 BIGA_1206 BIGA_1207 BIGA_1207 BIGA_1429 BIGA_1429 BIGA_1430 BIGA_1430 BIGA_1431 BIGA_1431 ugpC ugpC BIGA_1738 BIGA_1738 BIGA_1739 BIGA_1739 BIGA_1740 BIGA_1740
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BIGA_1138Sugar permease of ABC transporter system. (303 aa)
BIGA_1139Sugar ABC superfamily ATP binding cassette transporter, membrane protein. (314 aa)
BIGA_1140ABC-type sugar transport system, periplasmic component. (434 aa)
BIGA_1205Sugar ABC transporter, permease-like protein. (275 aa)
BIGA_1206ABC transporter permease. (310 aa)
BIGA_1207ABC transporter, solute-binding protein. (462 aa)
BIGA_1429ABC transporter membrane spanning protein. (289 aa)
BIGA_1430Putative binding protein-dependent transporter. (345 aa)
BIGA_1431Family 1 extracellular solute-binding protein. (425 aa)
ugpCSugars ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (375 aa)
BIGA_1738Sugar binding protein of ABC transporter system. (439 aa)
BIGA_1739Raffinose transporter permease. (299 aa)
BIGA_1740Sugar ABC superfamily ATP binding cassette transporter, membrane protein. (291 aa)
Your Current Organism:
Bifidobacterium gallinarum
NCBI taxonomy Id: 78344
Other names: AS 1.2283, ATCC 33777, B. gallinarum, BCRC 14679, CCRC 14679, CCRC:14679, CCUG 34990, DSM 20670, JCM 6291, LMG 11586, LMG:11586, strain Ch206-5
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