12 items (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tbp	Uncharacterized protein. (818 aa)
	taf8	Transcription initiation factor TFIID subunit 8. (317 aa)
	taf7	TAFII55_N domain-containing protein. (192 aa)
	taf13	Uncharacterized protein. (133 aa)
	taf6	TAF domain-containing protein. (650 aa)
	taf10	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
	taf1	Transcription initiation factor TFIID subunit. (2000 aa)
	taf2	TBP-associated factor 2. (1201 aa)
	taf3	PHD-type domain-containing protein. (874 aa)
	taf4	TAFH domain-containing protein. (1056 aa)
	taf12	TFIID_20kDa domain-containing protein. (222 aa)
	taf11	TAFII28 domain-containing protein. (210 aa)

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
taf1	taf10	ENSCMIP00000020571	ENSCMIP00000016892	Transcription initiation factor TFIID subunit.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.999
taf1	taf11	ENSCMIP00000020571	ENSCMIP00000042171	Transcription initiation factor TFIID subunit.	TAFII28 domain-containing protein.	0.999
taf1	taf12	ENSCMIP00000020571	ENSCMIP00000038799	Transcription initiation factor TFIID subunit.	TFIID_20kDa domain-containing protein.	0.999
taf1	taf13	ENSCMIP00000020571	ENSCMIP00000008218	Transcription initiation factor TFIID subunit.	Uncharacterized protein.	0.999
taf1	taf2	ENSCMIP00000020571	ENSCMIP00000025280	Transcription initiation factor TFIID subunit.	TBP-associated factor 2.	0.999
taf1	taf3	ENSCMIP00000020571	ENSCMIP00000029894	Transcription initiation factor TFIID subunit.	PHD-type domain-containing protein.	0.997
taf1	taf4	ENSCMIP00000020571	ENSCMIP00000036242	Transcription initiation factor TFIID subunit.	TAFH domain-containing protein.	0.954
taf1	taf6	ENSCMIP00000020571	ENSCMIP00000012647	Transcription initiation factor TFIID subunit.	TAF domain-containing protein.	0.999
taf1	taf7	ENSCMIP00000020571	ENSCMIP00000003842	Transcription initiation factor TFIID subunit.	TAFII55_N domain-containing protein.	0.999
taf1	taf8	ENSCMIP00000020571	ENSCMIP00000003396	Transcription initiation factor TFIID subunit.	Transcription initiation factor TFIID subunit 8.	0.995
taf1	tbp	ENSCMIP00000020571	ENSCMIP00000002060	Transcription initiation factor TFIID subunit.	Uncharacterized protein.	0.931
taf10	taf1	ENSCMIP00000016892	ENSCMIP00000020571	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Transcription initiation factor TFIID subunit.	0.999
taf10	taf11	ENSCMIP00000016892	ENSCMIP00000042171	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAFII28 domain-containing protein.	0.999
taf10	taf12	ENSCMIP00000016892	ENSCMIP00000038799	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TFIID_20kDa domain-containing protein.	0.999
taf10	taf13	ENSCMIP00000016892	ENSCMIP00000008218	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.999
taf10	taf2	ENSCMIP00000016892	ENSCMIP00000025280	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TBP-associated factor 2.	0.999
taf10	taf3	ENSCMIP00000016892	ENSCMIP00000029894	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	PHD-type domain-containing protein.	0.998
taf10	taf4	ENSCMIP00000016892	ENSCMIP00000036242	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAFH domain-containing protein.	0.931
taf10	taf6	ENSCMIP00000016892	ENSCMIP00000012647	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAF domain-containing protein.	0.999
taf10	taf7	ENSCMIP00000016892	ENSCMIP00000003842	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAFII55_N domain-containing protein.	0.999