63 items (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Sdc4	Uncharacterized protein. (186 aa)
	csgalnact2	Hexosyltransferase. (537 aa)
	sdc2	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (213 aa)
	ENSCMIP00000006485	Sulfotransferase; Belongs to the sulfotransferase 1 family. (256 aa)
	LOC103177375	Uncharacterized protein. (879 aa)
	dse	Uncharacterized protein. (958 aa)
	ENSCMIP00000008908	C1q domain-containing protein. (1429 aa)
	hs3st5	Sulfotransferase; Belongs to the sulfotransferase 1 family. (345 aa)
	ndst2	Uncharacterized protein. (881 aa)
	chsy1	Hexosyltransferase. (809 aa)
	b3gat3	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (300 aa)
	chsy3	Hexosyltransferase. (863 aa)
	ndst1	Uncharacterized protein. (878 aa)
	chst15	Uncharacterized protein. (546 aa)
	hs2st1	Uncharacterized protein. (341 aa)
	ust	Uncharacterized protein. (387 aa)
	hs3st1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (315 aa)
	chst11	Carbohydrate sulfotransferase. (352 aa)
	LOC103187765	Sulfotransferase; Belongs to the sulfotransferase 1 family. (331 aa)
	chst3	Sulfotransferase; Belongs to the sulfotransferase 1 family. (482 aa)
	xylt1	Uncharacterized protein. (881 aa)
	ENSCMIP00000022261	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (232 aa)
	gpc4	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (551 aa)
	LOC103184956	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (748 aa)
	Hs6st3	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (237 aa)
	ENSCMIP00000022537	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (180 aa)
	cspg4	Uncharacterized protein. (2254 aa)
	LOC103188800	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (608 aa)
	LOC103189052	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (555 aa)
	ENSCMIP00000025400	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (553 aa)
	ENSCMIP00000025417	Uncharacterized protein. (122 aa)
	glce	C5-epim_C domain-containing protein. (629 aa)
	extl2	Glyco_transf_64 domain-containing protein. (321 aa)
	Col2a1	Uncharacterized protein. (1199 aa)
	b4galt7-2	Uncharacterized protein. (321 aa)
	Col9a1	LAM_G_DOMAIN domain-containing protein. (140 aa)
	LOC103186633	Sulfotransferase; Belongs to the sulfotransferase 1 family. (485 aa)
	extl3	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (919 aa)
	chst14	Carbohydrate sulfotransferase. (360 aa)
	ENSCMIP00000031150	Uncharacterized protein. (121 aa)
	dsel	Sulfotransfer_1 domain-containing protein. (1195 aa)
	col4a2	Collagen IV NC1 domain-containing protein. (1724 aa)
	col4a1	Collagen IV NC1 domain-containing protein. (1459 aa)
	hs6st1	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (408 aa)
	LOC103175980	Sulfotransferase; Belongs to the sulfotransferase 1 family. (397 aa)
	b3galt6	Hexosyltransferase. (310 aa)
	sdc1	4.1m domain-containing protein. (331 aa)
	csgalnact1	Hexosyltransferase. (535 aa)
	ext2	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (748 aa)
	chst7	Sulfotransferase; Belongs to the sulfotransferase 1 family. (446 aa)
	LOC103190645	Hexosyltransferase. (444 aa)
	Sdc3	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (70 aa)
	hs3st6	Sulfotransferase; Belongs to the sulfotransferase 1 family. (299 aa)
	ENSCMIP00000042317	Sulfotransferase; Belongs to the sulfotransferase 1 family. (276 aa)
	LOC103175713	Sulfotransferase; Belongs to the sulfotransferase 1 family. (371 aa)
	LOC103185802	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (529 aa)
	ENSCMIP00000042428	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (371 aa)
	ENSCMIP00000042790	Sulfotransferase; Belongs to the sulfotransferase 1 family. (289 aa)
	LOC103179627	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (747 aa)
	ENSCMIP00000047349	Glyco_trans_2-like domain-containing protein. (392 aa)
	Chst13	Carbohydrate sulfotransferase. (342 aa)
	ENSCMIP00000048376	Uncharacterized protein. (2228 aa)
	xylt2	Uncharacterized protein. (856 aa)

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Chst13	LOC103175980	ENSCMIP00000047558	ENSCMIP00000034513	Carbohydrate sulfotransferase.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.560
Chst13	chst15	ENSCMIP00000047558	ENSCMIP00000015914	Carbohydrate sulfotransferase.	Uncharacterized protein.	0.553
Chst13	chst7	ENSCMIP00000047558	ENSCMIP00000039609	Carbohydrate sulfotransferase.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.646
Chst13	csgalnact1	ENSCMIP00000047558	ENSCMIP00000038196	Carbohydrate sulfotransferase.	Hexosyltransferase.	0.544
Chst13	csgalnact2	ENSCMIP00000047558	ENSCMIP00000004252	Carbohydrate sulfotransferase.	Hexosyltransferase.	0.548
Chst13	dsel	ENSCMIP00000047558	ENSCMIP00000031597	Carbohydrate sulfotransferase.	Sulfotransfer_1 domain-containing protein.	0.461
Col2a1	Col9a1	ENSCMIP00000028233	ENSCMIP00000030279	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.522
Col2a1	Sdc4	ENSCMIP00000028233	ENSCMIP00000002018	Uncharacterized protein.	Uncharacterized protein.	0.650
Col2a1	sdc1	ENSCMIP00000028233	ENSCMIP00000037218	Uncharacterized protein.	4.1m domain-containing protein.	0.650
Col9a1	Col2a1	ENSCMIP00000030279	ENSCMIP00000028233	LAM_G_DOMAIN domain-containing protein.	Uncharacterized protein.	0.522
Col9a1	Sdc4	ENSCMIP00000030279	ENSCMIP00000002018	LAM_G_DOMAIN domain-containing protein.	Uncharacterized protein.	0.650
Col9a1	sdc1	ENSCMIP00000030279	ENSCMIP00000037218	LAM_G_DOMAIN domain-containing protein.	4.1m domain-containing protein.	0.650
ENSCMIP00000006485	ENSCMIP00000042317	ENSCMIP00000006485	ENSCMIP00000042317	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.901
ENSCMIP00000006485	sdc1	ENSCMIP00000006485	ENSCMIP00000037218	Sulfotransferase; Belongs to the sulfotransferase 1 family.	4.1m domain-containing protein.	0.422
ENSCMIP00000008908	Sdc4	ENSCMIP00000008908	ENSCMIP00000002018	C1q domain-containing protein.	Uncharacterized protein.	0.650
ENSCMIP00000008908	sdc1	ENSCMIP00000008908	ENSCMIP00000037218	C1q domain-containing protein.	4.1m domain-containing protein.	0.650
ENSCMIP00000022261	ENSCMIP00000022537	ENSCMIP00000022261	ENSCMIP00000022537	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.900
ENSCMIP00000022261	ENSCMIP00000025400	ENSCMIP00000022261	ENSCMIP00000025400	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.459
ENSCMIP00000022261	Hs6st3	ENSCMIP00000022261	ENSCMIP00000022535	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.901
ENSCMIP00000022261	LOC103189052	ENSCMIP00000022261	ENSCMIP00000024700	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.459