42 items (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pxdn	Uncharacterized protein. (1406 aa)
	gpx8	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (209 aa)
	mgst2	Microsomal glutathione S-transferase 2. (147 aa)
	ENSCMIP00000048207	Uncharacterized protein. (81 aa)
	mgst3	Uncharacterized protein. (160 aa)
	LOC103180010	Thioredoxin domain-containing protein. (220 aa)
	LOC103180009	Putative peroxiredoxin 6. (224 aa)
	mfsd11	Uncharacterized protein. (422 aa)
	gpx1	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (141 aa)
	LOC103174507	Thioredoxin domain-containing protein. (114 aa)
	txndc17	DUF953 domain-containing protein. (75 aa)
	ENSCMIP00000003547	Uncharacterized protein. (66 aa)
	LOC103177580	Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (246 aa)
	prdx2	Natural killer cell enhancing factor. (198 aa)
	rttn	RTTN_N domain-containing protein. (2035 aa)
	ltc4s	Leukotriene C4 synthase. (169 aa)
	Tpo	Sushi domain-containing protein. (850 aa)
	ptgs2	EGF-like domain-containing protein. (655 aa)
	ptges	Prostaglandin E synthase. (145 aa)
	LOC103186298	Uncharacterized protein. (1444 aa)
	pxdnl	Uncharacterized protein. (1459 aa)
	LOC103190560	BTB domain-containing protein. (491 aa)
	ptgs1	EGF-like domain-containing protein. (573 aa)
	LOC103185642	Uncharacterized protein. (112 aa)
	prdx4	Peroxiredoxin 4. (259 aa)
	LOC103189631	Uncharacterized protein. (1522 aa)
	gpx4	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (127 aa)
	ENSCMIP00000027396	Uncharacterized protein. (76 aa)
	mgst1	Uncharacterized protein. (115 aa)
	LOC103175078	Uncharacterized protein. (764 aa)
	nox5	Uncharacterized protein. (749 aa)
	LOC103188823	Uncharacterized protein. (1518 aa)
	LOC103180492	Uncharacterized protein. (954 aa)
	gpx7	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (141 aa)
	prdx1	Peroxiredoxin-1. (199 aa)
	Gpx2	Glutathione peroxidase 2. (90 aa)
	ENSCMIP00000022741	Uncharacterized protein. (77 aa)
	prdx3	Thioredoxin domain-containing protein. (250 aa)
	ENSCMIP00000021759	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (217 aa)
	cat	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (528 aa)
	Gpx3	Glutathione peroxidase 3 (Plasma). (102 aa)
	ENSCMIP00000014559	Uncharacterized protein. (67 aa)

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000003547	ENSCMIP00000048207	ENSCMIP00000003547	ENSCMIP00000048207	Uncharacterized protein.	Uncharacterized protein.	0.714
ENSCMIP00000003547	LOC103180009	ENSCMIP00000003547	ENSCMIP00000044841	Uncharacterized protein.	Putative peroxiredoxin 6.	0.736
ENSCMIP00000003547	LOC103180010	ENSCMIP00000003547	ENSCMIP00000044852	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.736
ENSCMIP00000003547	cat	ENSCMIP00000003547	ENSCMIP00000018464	Uncharacterized protein.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.538
ENSCMIP00000003547	prdx1	ENSCMIP00000003547	ENSCMIP00000022781	Uncharacterized protein.	Peroxiredoxin-1.	0.714
ENSCMIP00000003547	prdx2	ENSCMIP00000003547	ENSCMIP00000011406	Uncharacterized protein.	Natural killer cell enhancing factor.	0.714
ENSCMIP00000003547	prdx3	ENSCMIP00000003547	ENSCMIP00000022281	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.714
ENSCMIP00000003547	prdx4	ENSCMIP00000003547	ENSCMIP00000030551	Uncharacterized protein.	Peroxiredoxin 4.	0.714
ENSCMIP00000014559	cat	ENSCMIP00000014559	ENSCMIP00000018464	Uncharacterized protein.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.440
ENSCMIP00000021759	cat	ENSCMIP00000021759	ENSCMIP00000018464	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.440
ENSCMIP00000022741	cat	ENSCMIP00000022741	ENSCMIP00000018464	Uncharacterized protein.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.440
ENSCMIP00000027396	Gpx2	ENSCMIP00000027396	ENSCMIP00000022744	Uncharacterized protein.	Glutathione peroxidase 2.	0.507
ENSCMIP00000027396	LOC103174507	ENSCMIP00000027396	ENSCMIP00000000578	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.536
ENSCMIP00000027396	cat	ENSCMIP00000027396	ENSCMIP00000018464	Uncharacterized protein.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.559
ENSCMIP00000027396	gpx1	ENSCMIP00000027396	ENSCMIP00000043916	Uncharacterized protein.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.650
ENSCMIP00000048207	ENSCMIP00000003547	ENSCMIP00000048207	ENSCMIP00000003547	Uncharacterized protein.	Uncharacterized protein.	0.714
ENSCMIP00000048207	LOC103174507	ENSCMIP00000048207	ENSCMIP00000000578	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.714
ENSCMIP00000048207	cat	ENSCMIP00000048207	ENSCMIP00000018464	Uncharacterized protein.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.621
Gpx2	ENSCMIP00000027396	ENSCMIP00000022744	ENSCMIP00000027396	Glutathione peroxidase 2.	Uncharacterized protein.	0.507
Gpx2	Gpx3	ENSCMIP00000022744	ENSCMIP00000014561	Glutathione peroxidase 2.	Glutathione peroxidase 3 (Plasma).	0.901