STRINGSTRING
ercc4 ercc4 ogg1 ogg1 NTHL1 NTHL1 ercc3 ercc3 xpa xpa ENSCMIP00000011378 ENSCMIP00000011378 LOC103177579 LOC103177579 ENSCMIP00000002845 ENSCMIP00000002845 LOC103174237 LOC103174237
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ercc4ERCC4 domain-containing protein. (939 aa)
ogg1ENDO3c domain-containing protein. (450 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (296 aa)
ercc3Uncharacterized protein. (783 aa)
xpaDNA repair protein complementing XP-A cells-like protein. (226 aa)
ENSCMIP00000011378Uncharacterized protein. (505 aa)
LOC103177579Uncharacterized protein. (1175 aa)
ENSCMIP00000002845Uncharacterized protein. (147 aa)
LOC103174237HELICc2 domain-containing protein. (108 aa)
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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