17 items (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ncan	Uncharacterized protein. (1209 aa)
	ENSCMIP00000049023	Hyaluronidase. (493 aa)
	LOC103181838	Hyaluronidase. (524 aa)
	ENSCMIP00000048376	Uncharacterized protein. (2228 aa)
	LOC103185296	C-type lectin domain-containing protein. (1990 aa)
	hexb	Beta-hexosaminidase. (564 aa)
	frem1	C-type lectin domain-containing protein. (2105 aa)
	LOC103176598	Hyaluronidase. (449 aa)
	LOC103176597	Hyaluronidase. (502 aa)
	fam149a	DUF3719 domain-containing protein. (679 aa)
	idua	Uncharacterized protein. (619 aa)
	ids	Sulfatase domain-containing protein. (584 aa)
	cspg4	Uncharacterized protein. (2254 aa)
	dcn	Decorin; May affect the rate of fibrils formation. (354 aa)
	fam149b1	DUF3719 domain-containing protein. (617 aa)
	vcan	Uncharacterized protein. (1497 aa)
	fras1	Uncharacterized protein. (3977 aa)

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000048376	dcn	ENSCMIP00000048376	ENSCMIP00000021491	Uncharacterized protein.	Decorin; May affect the rate of fibrils formation.	0.504
LOC103176597	idua	ENSCMIP00000041545	ENSCMIP00000031437	Hyaluronidase.	Uncharacterized protein.	0.910
LOC103176598	idua	ENSCMIP00000041554	ENSCMIP00000031437	Hyaluronidase.	Uncharacterized protein.	0.912
LOC103181838	idua	ENSCMIP00000048576	ENSCMIP00000031437	Hyaluronidase.	Uncharacterized protein.	0.912
LOC103185296	fras1	ENSCMIP00000047398	ENSCMIP00000015009	C-type lectin domain-containing protein.	Uncharacterized protein.	0.473
cspg4	dcn	ENSCMIP00000023581	ENSCMIP00000021491	Uncharacterized protein.	Decorin; May affect the rate of fibrils formation.	0.504
dcn	ENSCMIP00000048376	ENSCMIP00000021491	ENSCMIP00000048376	Decorin; May affect the rate of fibrils formation.	Uncharacterized protein.	0.504
dcn	cspg4	ENSCMIP00000021491	ENSCMIP00000023581	Decorin; May affect the rate of fibrils formation.	Uncharacterized protein.	0.504
dcn	vcan	ENSCMIP00000021491	ENSCMIP00000016780	Decorin; May affect the rate of fibrils formation.	Uncharacterized protein.	0.794
fras1	LOC103185296	ENSCMIP00000015009	ENSCMIP00000047398	Uncharacterized protein.	C-type lectin domain-containing protein.	0.473
fras1	frem1	ENSCMIP00000015009	ENSCMIP00000041894	Uncharacterized protein.	C-type lectin domain-containing protein.	0.890
frem1	fras1	ENSCMIP00000041894	ENSCMIP00000015009	C-type lectin domain-containing protein.	Uncharacterized protein.	0.890
ids	idua	ENSCMIP00000030049	ENSCMIP00000031437	Sulfatase domain-containing protein.	Uncharacterized protein.	0.945
idua	LOC103176597	ENSCMIP00000031437	ENSCMIP00000041545	Uncharacterized protein.	Hyaluronidase.	0.910
idua	LOC103176598	ENSCMIP00000031437	ENSCMIP00000041554	Uncharacterized protein.	Hyaluronidase.	0.912
idua	LOC103181838	ENSCMIP00000031437	ENSCMIP00000048576	Uncharacterized protein.	Hyaluronidase.	0.912
idua	ids	ENSCMIP00000031437	ENSCMIP00000030049	Uncharacterized protein.	Sulfatase domain-containing protein.	0.945
ncan	vcan	ENSCMIP00000009639	ENSCMIP00000016780	Uncharacterized protein.	Uncharacterized protein.	0.726
vcan	dcn	ENSCMIP00000016780	ENSCMIP00000021491	Uncharacterized protein.	Decorin; May affect the rate of fibrils formation.	0.794
vcan	ncan	ENSCMIP00000016780	ENSCMIP00000009639	Uncharacterized protein.	Uncharacterized protein.	0.726