STRINGSTRING
ENSCMIP00000000152 ENSCMIP00000000152 ENSCMIP00000000233 ENSCMIP00000000233 LOC103174485 LOC103174485 LOC103174076 LOC103174076 mybl1 mybl1 nup85 nup85 LOC103174263 LOC103174263 polr2k polr2k polr2g polr2g ipo8 ipo8 ENSCMIP00000002936 ENSCMIP00000002936 ENSCMIP00000003111 ENSCMIP00000003111 LOC103174423 LOC103174423 ENSCMIP00000003781 ENSCMIP00000003781 ENSCMIP00000003831 ENSCMIP00000003831 ENSCMIP00000004257 ENSCMIP00000004257 xpo5 xpo5 ENSCMIP00000005506 ENSCMIP00000005506 ENSCMIP00000005675 ENSCMIP00000005675 LOC103172909 LOC103172909 LOC103172329 LOC103172329 ENSCMIP00000008296 ENSCMIP00000008296 polr2c polr2c nup54 nup54 ago4 ago4 ago1 ago1 elac2 elac2 ENSCMIP00000016713 ENSCMIP00000016713 nup153 nup153 nup133 nup133 nup43 nup43 ENSCMIP00000018780 ENSCMIP00000018780 ENSCMIP00000019999 ENSCMIP00000019999 nup58 nup58 ENSCMIP00000020451 ENSCMIP00000020451 sec13 sec13 V9KPU8_CALMI V9KPU8_CALMI tnrc6c tnrc6c tpr tpr aaas aaas tsn tsn nup42 nup42 ENSCMIP00000039931 ENSCMIP00000039931 ENSCMIP00000039901 ENSCMIP00000039901 ENSCMIP00000038913 ENSCMIP00000038913 polr2b polr2b ago2 ago2 ranbp2 ranbp2 rae1 rae1 ipo7 ipo7 adgrd1 adgrd1 drosha drosha ran ran piwil1 piwil1 nup35 nup35 nup188 nup188 dicer1 dicer1 nup50 nup50 prkra prkra polr2d polr2d tdrd9 tdrd9 dgcr8 dgcr8 nup98 nup98 nup205 nup205 piwil4 piwil4 tnrc6a tnrc6a nup160 nup160 nup210l nup210l polr2j polr2j polr2e polr2e nup93 nup93 tnrc6b tnrc6b polr2f polr2f LOC103180519 LOC103180519 tsnax tsnax ndc1 ndc1 tarbp2 tarbp2 nup37 nup37 nup88 nup88 nup210 nup210 nup107 nup107 LOC103186556 LOC103186556 LOC103186584 LOC103186584 polr2h polr2h ENSCMIP00000022497 ENSCMIP00000022497 asz1 asz1 henmt1 henmt1 LOC103187764 LOC103187764 piwil2 piwil2 tdrd6 tdrd6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCMIP00000000152Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
ENSCMIP00000000233Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
LOC103174485Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103174076Nucleoporin_C domain-containing protein. (221 aa)
mybl1Uncharacterized protein. (745 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (701 aa)
LOC103174263Uncharacterized protein. (177 aa)
polr2kUncharacterized protein. (63 aa)
polr2gUncharacterized protein. (152 aa)
ipo8Importin N-terminal domain-containing protein. (1053 aa)
ENSCMIP00000002936Uncharacterized protein. (66 aa)
ENSCMIP00000003111Nucleoporin_N domain-containing protein. (72 aa)
LOC103174423Histone H4-like. (103 aa)
ENSCMIP00000003781annotation not available (94 aa)
ENSCMIP00000003831Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
ENSCMIP00000004257Histone H2B; Belongs to the histone H2B family. (126 aa)
xpo5Importin N-terminal domain-containing protein. (1198 aa)
ENSCMIP00000005506Uncharacterized protein; Belongs to the histone H2B family. (109 aa)
ENSCMIP00000005675WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (65 aa)
LOC103172909Nucleoporin_N domain-containing protein. (185 aa)
LOC103172329Nsp1_C domain-containing protein. (440 aa)
ENSCMIP00000008296SAM domain-containing protein. (355 aa)
polr2cRPOLD domain-containing protein. (295 aa)
nup54Nucleoporin p54-like protein. (519 aa)
ago4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (882 aa)
ago1Uncharacterized protein; Belongs to the argonaute family. (872 aa)
elac2Lactamase_B domain-containing protein. (748 aa)
ENSCMIP00000016713Uncharacterized protein. (295 aa)
nup153Uncharacterized protein. (1362 aa)
nup133Uncharacterized protein. (1149 aa)
nup43WD_REPEATS_REGION domain-containing protein. (335 aa)
ENSCMIP00000018780Uncharacterized protein. (152 aa)
ENSCMIP00000019999Uncharacterized protein. (1967 aa)
nup58Nucleoporin p58/p45-like protein. (584 aa)
ENSCMIP00000020451Uncharacterized protein. (121 aa)
sec13WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (320 aa)
V9KPU8_CALMICentrosomal protein CEP192-like protein; Belongs to the WD repeat SEC13 family. (423 aa)
tnrc6cUncharacterized protein. (1927 aa)
tprTPR_MLP1_2 domain-containing protein. (2394 aa)
aaasWD_REPEATS_REGION domain-containing protein. (542 aa)
tsnUncharacterized protein. (218 aa)
nup42Uncharacterized protein. (394 aa)
ENSCMIP00000039931Uncharacterized protein. (237 aa)
ENSCMIP00000039901Histone domain-containing protein; Belongs to the histone H2B family. (169 aa)
ENSCMIP00000038913Nup214_FG domain-containing protein. (1652 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1208 aa)
ago2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (872 aa)
ranbp2Uncharacterized protein. (3000 aa)
rae1WD_REPEATS_REGION domain-containing protein. (368 aa)
ipo7Importin N-terminal domain-containing protein. (1044 aa)
adgrd1Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (839 aa)
droshaUncharacterized protein. (1337 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (237 aa)
piwil1Uncharacterized protein; Belongs to the argonaute family. (840 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (345 aa)
nup188Uncharacterized protein. (1708 aa)
dicer1Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1917 aa)
nup50Nuclear pore complex protein Nup50. (475 aa)
prkraUncharacterized protein. (411 aa)
polr2dRPOL4c domain-containing protein. (170 aa)
tdrd9Uncharacterized protein. (1395 aa)
dgcr8Uncharacterized protein. (790 aa)
nup98Peptidase S59 domain-containing protein. (1759 aa)
nup205Uncharacterized protein. (2025 aa)
piwil4Uncharacterized protein; Belongs to the argonaute family. (813 aa)
tnrc6aTNRC6-PABC_bdg domain-containing protein. (1851 aa)
nup160Uncharacterized protein. (1444 aa)
nup210lBIG2 domain-containing protein. (1828 aa)
polr2jRNA_pol_L_2 domain-containing protein. (115 aa)
polr2eUncharacterized protein. (218 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (848 aa)
tnrc6bTNRC6-PABC_bdg domain-containing protein. (1748 aa)
polr2fUncharacterized protein. (98 aa)
LOC103180519Uncharacterized protein. (1057 aa)
tsnaxUncharacterized protein. (303 aa)
ndc1Uncharacterized protein. (675 aa)
tarbp2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (329 aa)
nup37WD_REPEATS_REGION domain-containing protein. (351 aa)
nup88Uncharacterized protein. (713 aa)
nup210Uncharacterized protein. (1869 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (921 aa)
LOC103186556Uncharacterized protein. (421 aa)
LOC103186584Tudor domain-containing protein. (517 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSCMIP00000022497ANK_REP_REGION domain-containing protein. (184 aa)
asz1Uncharacterized protein. (171 aa)
henmt1Uncharacterized protein. (377 aa)
LOC103187764Histone H2A; Belongs to the histone H2A family. (128 aa)
piwil2Uncharacterized protein; Belongs to the argonaute family. (852 aa)
tdrd6Uncharacterized protein. (1827 aa)
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.