STRINGSTRING
polr2h polr2h taf11 taf11 ENSCMIP00000040109 ENSCMIP00000040109 tbpl1 tbpl1 gtf2a1 gtf2a1 polr2b polr2b taf12 taf12 gtf2e2 gtf2e2 LOC103188100 LOC103188100 taf4 taf4 spag16 spag16 gtf2h3 gtf2h3 LOC103178231 LOC103178231 polr2d polr2d taf3 taf3 gtf2h5 gtf2h5 polr2j polr2j gtf2f2 gtf2f2 polr2e polr2e polr2f polr2f gtf2h1 gtf2h1 taf2 taf2 LOC103173973 LOC103173973 LOC103180788 LOC103180788 ENSCMIP00000004147 ENSCMIP00000004147 taf7 taf7 ENSCMIP00000002936 ENSCMIP00000002936 polr2g polr2g polr2k polr2k tbp tbp LOC103174263 LOC103174263 LOC103174237 LOC103174237 LOC103174512 LOC103174512 LOC103178499 LOC103178499 mnat1 mnat1 gtf2e1 gtf2e1 LOC103179743 LOC103179743 taf13 taf13 taf5 taf5 polr2c polr2c gtf2f1 gtf2f1 LOC103173200 LOC103173200 gtf2a2 gtf2a2 taf6 taf6 ccnh ccnh LOC103177871 LOC103177871 ercc3 ercc3 gtf2b gtf2b taf10 taf10 ENSCMIP00000017557 ENSCMIP00000017557 ENSCMIP00000017560 ENSCMIP00000017560 taf5l taf5l gtf2h2 gtf2h2 ENSCMIP00000018780 ENSCMIP00000018780 taf1 taf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
taf11TAFII28 domain-containing protein. (210 aa)
ENSCMIP00000040109WD_REPEATS_REGION domain-containing protein. (92 aa)
tbpl1TATA box-binding protein-like protein 1. (186 aa)
gtf2a1Uncharacterized protein. (406 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1208 aa)
taf12TFIID_20kDa domain-containing protein. (222 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (289 aa)
LOC103188100TAFH domain-containing protein. (754 aa)
taf4TAFH domain-containing protein. (1056 aa)
spag16WD_REPEATS_REGION domain-containing protein. (511 aa)
gtf2h3Uncharacterized protein. (320 aa)
LOC103178231HTH TFE/IIEalpha-type domain-containing protein. (413 aa)
polr2dRPOL4c domain-containing protein. (170 aa)
taf3PHD-type domain-containing protein. (874 aa)
gtf2h5General transcription factor IIH subunit 5. (71 aa)
polr2jRNA_pol_L_2 domain-containing protein. (115 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (288 aa)
polr2eUncharacterized protein. (218 aa)
polr2fUncharacterized protein. (98 aa)
gtf2h1Uncharacterized protein. (592 aa)
taf2TBP-associated factor 2. (1201 aa)
LOC103173973Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (183 aa)
LOC103180788Uncharacterized protein. (518 aa)
ENSCMIP00000004147RNA_pol_Rpb1_1 domain-containing protein. (182 aa)
taf7TAFII55_N domain-containing protein. (192 aa)
ENSCMIP00000002936Uncharacterized protein. (66 aa)
polr2gUncharacterized protein. (152 aa)
polr2kUncharacterized protein. (63 aa)
tbpUncharacterized protein. (818 aa)
LOC103174263Uncharacterized protein. (177 aa)
LOC103174237HELICc2 domain-containing protein. (108 aa)
LOC103174512Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (115 aa)
LOC103178499Uncharacterized protein. (333 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
gtf2e1General transcription factor IIE subunit 1. (429 aa)
LOC103179743TAFH domain-containing protein. (745 aa)
taf13Uncharacterized protein. (133 aa)
taf5Uncharacterized protein. (761 aa)
polr2cRPOLD domain-containing protein. (295 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (243 aa)
LOC103173200Uncharacterized protein. (400 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
taf6TAF domain-containing protein. (650 aa)
ccnhCYCLIN domain-containing protein; Belongs to the cyclin family. (340 aa)
LOC103177871Transcription initiation factor TFIID subunit 9. (253 aa)
ercc3Uncharacterized protein. (783 aa)
gtf2bTFIIB-type domain-containing protein. (321 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
ENSCMIP00000017557WD_REPEATS_REGION domain-containing protein. (118 aa)
ENSCMIP00000017560WD_REPEATS_REGION domain-containing protein. (142 aa)
taf5lTFIID_NTD2 domain-containing protein. (325 aa)
gtf2h2General transcription factor IIH subunit. (398 aa)
ENSCMIP00000018780Uncharacterized protein. (152 aa)
taf1Transcription initiation factor TFIID subunit. (2000 aa)
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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