STRINGSTRING
sumo1 sumo1 usp15 usp15 LOC103186049 LOC103186049 LOC103183812 LOC103183812 usp1 usp1 rad50 rad50 uba7 uba7 mdm2 mdm2 usp4 usp4 sumo2 sumo2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sumo1Small ubiquitin-related modifier. (111 aa)
usp15Ubiquitin carboxyl-terminal hydrolase. (995 aa)
LOC103186049Small ubiquitin-related modifier. (124 aa)
LOC103183812Small ubiquitin-related modifier. (107 aa)
usp1Ubiquitin carboxyl-terminal hydrolase. (785 aa)
rad50Zinc-hook domain-containing protein. (1312 aa)
uba7UBA_e1_C domain-containing protein. (1052 aa)
mdm2RING-type domain-containing protein; Belongs to the MDM2/MDM4 family. (452 aa)
usp4Ubiquitin carboxyl-terminal hydrolase. (978 aa)
sumo2Small ubiquitin-related modifier. (113 aa)
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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