17 items (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pink1	Protein kinase domain-containing protein. (415 aa)
	sumo2	Small ubiquitin-related modifier. (113 aa)
	Rabif	Uncharacterized protein. (88 aa)
	LOC103173852	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (182 aa)
	rab3a	Uncharacterized protein. (224 aa)
	sumo1	Small ubiquitin-related modifier. (111 aa)
	rab10	Ras-related protein Rab-10-like protein. (200 aa)
	aamp	WD_REPEATS_REGION domain-containing protein. (419 aa)
	pxdn	Uncharacterized protein. (1406 aa)
	LOC103186049	Small ubiquitin-related modifier. (124 aa)
	LOC103183812	Small ubiquitin-related modifier. (107 aa)
	snca	Alpha-synuclein; Belongs to the synuclein family. (144 aa)
	rab8a	Uncharacterized protein. (233 aa)
	gdi2	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (435 aa)
	pxdnl	Uncharacterized protein. (1459 aa)
	LOC103186298	Uncharacterized protein. (1444 aa)
	LOC103176650	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (463 aa)

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103173852	Rabif	ENSCMIP00000004808	ENSCMIP00000002574	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.644
LOC103173852	aamp	ENSCMIP00000004808	ENSCMIP00000013417	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	WD_REPEATS_REGION domain-containing protein.	0.438
LOC103173852	rab10	ENSCMIP00000004808	ENSCMIP00000012027	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Ras-related protein Rab-10-like protein.	0.822
LOC103173852	rab3a	ENSCMIP00000004808	ENSCMIP00000010874	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.660
LOC103173852	rab8a	ENSCMIP00000004808	ENSCMIP00000025812	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.823
LOC103176650	Rabif	ENSCMIP00000045456	ENSCMIP00000002574	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.644
LOC103176650	aamp	ENSCMIP00000045456	ENSCMIP00000013417	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	WD_REPEATS_REGION domain-containing protein.	0.438
LOC103176650	rab10	ENSCMIP00000045456	ENSCMIP00000012027	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Ras-related protein Rab-10-like protein.	0.822
LOC103176650	rab3a	ENSCMIP00000045456	ENSCMIP00000010874	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.660
LOC103176650	rab8a	ENSCMIP00000045456	ENSCMIP00000025812	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.823
LOC103183812	LOC103186049	ENSCMIP00000018808	ENSCMIP00000018701	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.661
LOC103183812	rab10	ENSCMIP00000018808	ENSCMIP00000012027	Small ubiquitin-related modifier.	Ras-related protein Rab-10-like protein.	0.534
LOC103183812	rab8a	ENSCMIP00000018808	ENSCMIP00000025812	Small ubiquitin-related modifier.	Uncharacterized protein.	0.535
LOC103183812	sumo2	ENSCMIP00000018808	ENSCMIP00000001390	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.658
LOC103186049	LOC103183812	ENSCMIP00000018701	ENSCMIP00000018808	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.661
LOC103186049	rab10	ENSCMIP00000018701	ENSCMIP00000012027	Small ubiquitin-related modifier.	Ras-related protein Rab-10-like protein.	0.529
LOC103186049	rab8a	ENSCMIP00000018701	ENSCMIP00000025812	Small ubiquitin-related modifier.	Uncharacterized protein.	0.530
LOC103186049	sumo1	ENSCMIP00000018701	ENSCMIP00000011551	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.661
Rabif	LOC103173852	ENSCMIP00000002574	ENSCMIP00000004808	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.644
Rabif	LOC103176650	ENSCMIP00000002574	ENSCMIP00000045456	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.644