36 items (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sumo2	Small ubiquitin-related modifier. (113 aa)
	LOC103181886	TIR domain-containing protein; Belongs to the Toll-like receptor family. (827 aa)
	irf4	IRF tryptophan pentad repeat domain-containing protein. (448 aa)
	calr3	Calreticulin. (415 aa)
	fyn	Tyrosine-protein kinase. (545 aa)
	ENSCMIP00000036812	CCAAT/enhancer-binding protein. (284 aa)
	stat1	Signal transducer and activator of transcription. (1112 aa)
	lck	Tyrosine-protein kinase. (511 aa)
	LOC103174764	CC chemokine. (97 aa)
	Ncor2	Uncharacterized protein. (215 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (389 aa)
	anxa1	Annexin. (352 aa)
	ncor1	Uncharacterized protein. (2349 aa)
	fos	Proto-oncogene c-Fos. (335 aa)
	batf	Basic leucine zipper transcriptional factor ATF-like protein. (123 aa)
	vcam1	Uncharacterized protein. (596 aa)
	LOC103182812	Calreticulin. (409 aa)
	LOC103191066	Signal transducer and activator of transcription. (744 aa)
	nr3c2	Uncharacterized protein. (971 aa)
	ace2	Angiotensin-converting enzyme. (838 aa)
	LOC103185499	TIR domain-containing protein. (799 aa)
	ENSCMIP00000021858	TIR domain-containing protein. (780 aa)
	Socs1	Uncharacterized protein. (188 aa)
	LOC103183812	Small ubiquitin-related modifier. (107 aa)
	LOC103186049	Small ubiquitin-related modifier. (124 aa)
	ace	Angiotensin-converting enzyme. (1298 aa)
	crebbp	Uncharacterized protein. (2452 aa)
	ENSCMIP00000013487	TIR domain-containing protein. (816 aa)
	nr3c1	Uncharacterized protein. (759 aa)
	ENSCMIP00000012693	Uncharacterized protein. (418 aa)
	itk	Tyrosine-protein kinase. (665 aa)
	sumo1	Small ubiquitin-related modifier. (111 aa)
	LOC103189177	Signal transducer and activator of transcription. (787 aa)
	stat3	Signal transducer and activator of transcription. (770 aa)
	LOC103173936	IRF-3 domain-containing protein. (220 aa)
	il10	Uncharacterized protein. (189 aa)

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000012693	LOC103182812	ENSCMIP00000012693	ENSCMIP00000025889	Uncharacterized protein.	Calreticulin.	0.902
ENSCMIP00000012693	calr3	ENSCMIP00000012693	ENSCMIP00000044200	Uncharacterized protein.	Calreticulin.	0.902
ENSCMIP00000013487	ENSCMIP00000021858	ENSCMIP00000013487	ENSCMIP00000021858	TIR domain-containing protein.	TIR domain-containing protein.	0.900
ENSCMIP00000013487	LOC103185499	ENSCMIP00000013487	ENSCMIP00000021867	TIR domain-containing protein.	TIR domain-containing protein.	0.900
ENSCMIP00000021858	ENSCMIP00000013487	ENSCMIP00000021858	ENSCMIP00000013487	TIR domain-containing protein.	TIR domain-containing protein.	0.900
ENSCMIP00000021858	LOC103185499	ENSCMIP00000021858	ENSCMIP00000021867	TIR domain-containing protein.	TIR domain-containing protein.	0.900
ENSCMIP00000036812	LOC103189177	ENSCMIP00000036812	ENSCMIP00000006846	CCAAT/enhancer-binding protein.	Signal transducer and activator of transcription.	0.463
ENSCMIP00000036812	LOC103191066	ENSCMIP00000036812	ENSCMIP00000024176	CCAAT/enhancer-binding protein.	Signal transducer and activator of transcription.	0.463
ENSCMIP00000036812	crebbp	ENSCMIP00000036812	ENSCMIP00000016551	CCAAT/enhancer-binding protein.	Uncharacterized protein.	0.415
ENSCMIP00000036812	fos	ENSCMIP00000036812	ENSCMIP00000028993	CCAAT/enhancer-binding protein.	Proto-oncogene c-Fos.	0.423
LOC103173936	crebbp	ENSCMIP00000005604	ENSCMIP00000016551	IRF-3 domain-containing protein.	Uncharacterized protein.	0.958
LOC103182812	ENSCMIP00000012693	ENSCMIP00000025889	ENSCMIP00000012693	Calreticulin.	Uncharacterized protein.	0.902
LOC103182812	calr3	ENSCMIP00000025889	ENSCMIP00000044200	Calreticulin.	Calreticulin.	0.901
LOC103183812	LOC103186049	ENSCMIP00000018808	ENSCMIP00000018701	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.661
LOC103183812	crebbp	ENSCMIP00000018808	ENSCMIP00000016551	Small ubiquitin-related modifier.	Uncharacterized protein.	0.922
LOC103183812	nr3c2	ENSCMIP00000018808	ENSCMIP00000024057	Small ubiquitin-related modifier.	Uncharacterized protein.	0.429
LOC103183812	sumo2	ENSCMIP00000018808	ENSCMIP00000001390	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.658
LOC103185499	ENSCMIP00000013487	ENSCMIP00000021867	ENSCMIP00000013487	TIR domain-containing protein.	TIR domain-containing protein.	0.900
LOC103185499	ENSCMIP00000021858	ENSCMIP00000021867	ENSCMIP00000021858	TIR domain-containing protein.	TIR domain-containing protein.	0.900
LOC103186049	LOC103183812	ENSCMIP00000018701	ENSCMIP00000018808	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.661