13 items (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rab8a	Uncharacterized protein. (233 aa)
	aspn	Asporin. (351 aa)
	LOC103183812	Small ubiquitin-related modifier. (107 aa)
	LOC103186049	Small ubiquitin-related modifier. (124 aa)
	rab10	Ras-related protein Rab-10-like protein. (200 aa)
	sumo1	Small ubiquitin-related modifier. (111 aa)
	pdp1	Pyruvate dehyrogenase phosphatase catalytic subunit 1-like protein. (543 aa)
	LOC103188634	PPM-type phosphatase domain-containing protein. (529 aa)
	sumo2	Small ubiquitin-related modifier. (113 aa)
	ppm1m	PPM-type phosphatase domain-containing protein. (470 aa)
	phlpp1	Uncharacterized protein. (1680 aa)
	rilpl2	Uncharacterized protein. (188 aa)
	rilpl1	RH2 domain-containing protein. (412 aa)

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103183812	LOC103186049	ENSCMIP00000018808	ENSCMIP00000018701	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.661
LOC103183812	rab10	ENSCMIP00000018808	ENSCMIP00000012027	Small ubiquitin-related modifier.	Ras-related protein Rab-10-like protein.	0.534
LOC103183812	rab8a	ENSCMIP00000018808	ENSCMIP00000025812	Small ubiquitin-related modifier.	Uncharacterized protein.	0.535
LOC103183812	sumo2	ENSCMIP00000018808	ENSCMIP00000001390	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.658
LOC103186049	LOC103183812	ENSCMIP00000018701	ENSCMIP00000018808	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.661
LOC103186049	rab10	ENSCMIP00000018701	ENSCMIP00000012027	Small ubiquitin-related modifier.	Ras-related protein Rab-10-like protein.	0.529
LOC103186049	rab8a	ENSCMIP00000018701	ENSCMIP00000025812	Small ubiquitin-related modifier.	Uncharacterized protein.	0.530
LOC103186049	sumo1	ENSCMIP00000018701	ENSCMIP00000011551	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.661
LOC103188634	phlpp1	ENSCMIP00000006360	ENSCMIP00000037085	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.666
LOC103188634	ppm1m	ENSCMIP00000006360	ENSCMIP00000043859	PPM-type phosphatase domain-containing protein.	PPM-type phosphatase domain-containing protein.	0.528
LOC103188634	rilpl1	ENSCMIP00000006360	ENSCMIP00000033793	PPM-type phosphatase domain-containing protein.	RH2 domain-containing protein.	0.520
LOC103188634	rilpl2	ENSCMIP00000006360	ENSCMIP00000035602	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.525
pdp1	phlpp1	ENSCMIP00000008476	ENSCMIP00000037085	Pyruvate dehyrogenase phosphatase catalytic subunit 1-like protein.	Uncharacterized protein.	0.667
pdp1	ppm1m	ENSCMIP00000008476	ENSCMIP00000043859	Pyruvate dehyrogenase phosphatase catalytic subunit 1-like protein.	PPM-type phosphatase domain-containing protein.	0.528
pdp1	rab10	ENSCMIP00000008476	ENSCMIP00000012027	Pyruvate dehyrogenase phosphatase catalytic subunit 1-like protein.	Ras-related protein Rab-10-like protein.	0.525
pdp1	rilpl1	ENSCMIP00000008476	ENSCMIP00000033793	Pyruvate dehyrogenase phosphatase catalytic subunit 1-like protein.	RH2 domain-containing protein.	0.513
pdp1	rilpl2	ENSCMIP00000008476	ENSCMIP00000035602	Pyruvate dehyrogenase phosphatase catalytic subunit 1-like protein.	Uncharacterized protein.	0.518
phlpp1	LOC103188634	ENSCMIP00000037085	ENSCMIP00000006360	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.666
phlpp1	pdp1	ENSCMIP00000037085	ENSCMIP00000008476	Uncharacterized protein.	Pyruvate dehyrogenase phosphatase catalytic subunit 1-like protein.	0.667
phlpp1	ppm1m	ENSCMIP00000037085	ENSCMIP00000043859	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.556