STRINGSTRING
eif4e1b eif4e1b LOC103189123 LOC103189123 nup85 nup85 sumo2 sumo2 rpp21 rpp21 ENSCMIP00000001790 ENSCMIP00000001790 gemin2 gemin2 pnn pnn ENSCMIP00000003290 ENSCMIP00000003290 tardbp tardbp LOC103184192 LOC103184192 pop1 pop1 LOC103173311 LOC103173311 nxf1 nxf1 xpo5 xpo5 eif4g2 eif4g2 clns1a clns1a eif4b eif4b ENSCMIP00000007775 ENSCMIP00000007775 LOC103172329 LOC103172329 pop7 pop7 eif4a3 eif4a3 gemin6 gemin6 sumo1 sumo1 pym1 pym1 eif1b eif1b eif2s3 eif2s3 upf1 upf1 cyfip2 cyfip2 nup54 nup54 Thoc7 Thoc7 LOC103171720 LOC103171720 snupn snupn LOC103188690 LOC103188690 ube2i ube2i eif4ebp3 eif4ebp3 LOC103182130 LOC103182130 ncbp1 ncbp1 thoc5 thoc5 nup153 nup153 nup133 nup133 pop5 pop5 eif3g eif3g nup43 nup43 eif4a2 eif4a2 xpot xpot rnps1 rnps1 LOC103186049 LOC103186049 LOC103183812 LOC103183812 LOC103190986 LOC103190986 ncbp2 ncbp2 Eif4g1 Eif4g1 nup58 nup58 LOC103182199 LOC103182199 eif4e2 eif4e2 eif2s1 eif2s1 gemin8 gemin8 Sap18 Sap18 tacc3 tacc3 rpp25l rpp25l eif2b3 eif2b3 nup107 nup107 nup210 nup210 nup37 nup37 Rpp25 Rpp25 ndc1 ndc1 LOC103180519 LOC103180519 eif3d eif3d nup93 nup93 gemin4 gemin4 strap strap eif2b2 eif2b2 nup160 nup160 phax phax rpp40 rpp40 casc3 casc3 fmr1 fmr1 xpo1 xpo1 eif3e eif3e nup205 nup205 nup98 nup98 elac1 elac1 trnt1 trnt1 eif2b5 eif2b5 srrm1 srrm1 fxr1 fxr1 nup50 nup50 nup188 nup188 pabpc1 pabpc1 pabpc4 pabpc4 upf3b upf3b eif2b1 eif2b1 ddx20 ddx20 nup35 nup35 eif5 eif5 ran ran eif3i eif3i rae1 rae1 thoc2 thoc2 Rpp38 Rpp38 pop4 pop4 rpp14 rpp14 ranbp2 ranbp2 gle1 gle1 eif2b4 eif2b4 tgs1 tgs1 nxt2 nxt2 cyfip1 cyfip1 LOC103186814 LOC103186814 nup42 nup42 eif2s2 eif2s2 eif3b eif3b tpr tpr eif3j eif3j eif3h eif3h gemin7 gemin7 nmd3 nmd3 eif3a eif3a rpp30 rpp30 eif3f eif3f ddx39a ddx39a thoc3 thoc3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
eif4e1bEukaryotic translation initiation factor 4E-like protein; Belongs to the eukaryotic initiation factor 4E family. (217 aa)
LOC103189123SUI1 domain-containing protein. (138 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (701 aa)
sumo2Small ubiquitin-related modifier. (113 aa)
rpp21Uncharacterized protein. (361 aa)
ENSCMIP00000001790MIF4G domain-containing protein. (334 aa)
gemin2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (264 aa)
pnnPinin. (628 aa)
ENSCMIP00000003290ULP_PROTEASE domain-containing protein. (121 aa)
tardbpTAR DNA-binding protein 43-like protein. (406 aa)
LOC103184192Uncharacterized protein. (469 aa)
pop1Uncharacterized protein. (896 aa)
LOC103173311Uncharacterized protein; Belongs to the DEAD box helicase family. (350 aa)
nxf1NTF2 domain-containing protein. (268 aa)
xpo5Importin N-terminal domain-containing protein. (1198 aa)
eif4g2Uncharacterized protein. (892 aa)
clns1aUncharacterized protein. (225 aa)
eif4bRRM domain-containing protein. (648 aa)
ENSCMIP00000007775RRM domain-containing protein. (145 aa)
LOC103172329Nsp1_C domain-containing protein. (440 aa)
pop7Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (142 aa)
eif4a3Uncharacterized protein; Belongs to the DEAD box helicase family. (411 aa)
gemin6Uncharacterized protein. (170 aa)
sumo1Small ubiquitin-related modifier. (111 aa)
pym1Mago-bind domain-containing protein. (221 aa)
eif1bSUI1 domain-containing protein. (156 aa)
eif2s3Tr-type G domain-containing protein. (485 aa)
upf1Uncharacterized protein. (1067 aa)
cyfip2Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1253 aa)
nup54Nucleoporin p54-like protein. (519 aa)
Thoc7Uncharacterized protein. (212 aa)
LOC103171720Tr-type G domain-containing protein. (356 aa)
snupnUncharacterized protein. (262 aa)
LOC103188690Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
ube2iUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (172 aa)
eif4ebp3Uncharacterized protein. (113 aa)
LOC103182130Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (219 aa)
ncbp1MIF4G domain-containing protein. (775 aa)
thoc5Uncharacterized protein. (702 aa)
nup153Uncharacterized protein. (1362 aa)
nup133Uncharacterized protein. (1149 aa)
pop5Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (168 aa)
eif3gEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (304 aa)
nup43WD_REPEATS_REGION domain-containing protein. (335 aa)
eif4a2Uncharacterized protein; Belongs to the DEAD box helicase family. (422 aa)
xpotExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (962 aa)
rnps1RRM domain-containing protein. (291 aa)
LOC103186049Small ubiquitin-related modifier. (124 aa)
LOC103183812Small ubiquitin-related modifier. (107 aa)
LOC103190986Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (464 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
Eif4g1Uncharacterized protein. (81 aa)
nup58Nucleoporin p58/p45-like protein. (584 aa)
LOC103182199Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family. (220 aa)
eif4e2Eukaryotic translation initiation factor 4E type 2-like protein; Belongs to the eukaryotic initiation factor 4E family. (234 aa)
eif2s1S1 motif domain-containing protein. (329 aa)
gemin8Uncharacterized protein. (260 aa)
Sap18Histone deacetylase complex subunit SAP18-like protein. (182 aa)
tacc3TACC_C domain-containing protein. (910 aa)
rpp25lAlba-like protein C9orf23. (187 aa)
eif2b3NTP_transferase domain-containing protein. (465 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (921 aa)
nup210Uncharacterized protein. (1869 aa)
nup37WD_REPEATS_REGION domain-containing protein. (351 aa)
Rpp25Alba domain-containing protein. (192 aa)
ndc1Uncharacterized protein. (675 aa)
LOC103180519Uncharacterized protein. (1057 aa)
eif3dEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (557 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (848 aa)
gemin4Uncharacterized protein. (1095 aa)
strapWD_REPEATS_REGION domain-containing protein. (363 aa)
eif2b2Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (349 aa)
nup160Uncharacterized protein. (1444 aa)
phaxRNA_GG_bind domain-containing protein. (429 aa)
rpp40Uncharacterized protein. (363 aa)
casc3Btz domain-containing protein. (715 aa)
fmr1Uncharacterized protein. (602 aa)
xpo1Exportin-1. (1071 aa)
eif3eEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (455 aa)
nup205Uncharacterized protein. (2025 aa)
nup98Peptidase S59 domain-containing protein. (1759 aa)
elac1Uncharacterized protein. (368 aa)
trnt1Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (387 aa)
eif2b5W2 domain-containing protein. (717 aa)
srrm1PWI domain-containing protein. (890 aa)
fxr1Uncharacterized protein. (684 aa)
nup50Nuclear pore complex protein Nup50. (475 aa)
nup188Uncharacterized protein. (1708 aa)
pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (632 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (640 aa)
upf3bUncharacterized protein. (426 aa)
eif2b1Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (306 aa)
ddx20Uncharacterized protein. (870 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (345 aa)
eif5Eukaryotic translation initiation factor 5-like protein. (429 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (237 aa)
eif3iEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (373 aa)
rae1WD_REPEATS_REGION domain-containing protein. (368 aa)
thoc2Uncharacterized protein. (1622 aa)
Rpp38Ribosomal_L7Ae domain-containing protein. (294 aa)
pop4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (281 aa)
rpp14Uncharacterized protein. (131 aa)
ranbp2Uncharacterized protein. (3000 aa)
gle1Nucleoporin GLE1. (688 aa)
eif2b4Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (534 aa)
tgs1Uncharacterized protein. (892 aa)
nxt2NTF2 domain-containing protein. (184 aa)
cyfip1Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1264 aa)
LOC103186814Importin N-terminal domain-containing protein. (1033 aa)
nup42Uncharacterized protein. (394 aa)
eif2s2eIF2B_5 domain-containing protein. (342 aa)
eif3bEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (706 aa)
tprTPR_MLP1_2 domain-containing protein. (2394 aa)
eif3jEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (244 aa)
eif3hEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (343 aa)
gemin7Uncharacterized protein. (127 aa)
nmd360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (506 aa)
eif3aEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1166 aa)
rpp30Ribonuclease P protein subunit p30. (269 aa)
eif3fEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (297 aa)
ddx39aUncharacterized protein. (492 aa)
thoc3WD_REPEATS_REGION domain-containing protein. (314 aa)
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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