18 items (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	polr2g	Uncharacterized protein. (152 aa)
	LOC103177281	DNA-directed RNA polymerases I and III subunit RPAC2-like protein. (119 aa)
	polr2c	RPOLD domain-containing protein. (295 aa)
	polr3h	Uncharacterized protein. (205 aa)
	polr3a	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1383 aa)
	twistnb	Uncharacterized protein. (347 aa)
	polr3e	Uncharacterized protein. (717 aa)
	polr3f	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (314 aa)
	polr1e	Uncharacterized protein. (426 aa)
	polr2h	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	polr2f	Uncharacterized protein. (98 aa)
	polr2e	Uncharacterized protein. (218 aa)
	polr2d	RPOL4c domain-containing protein. (170 aa)
	polr3b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1098 aa)
	polr1b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
	polr2b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1208 aa)
	polr3g	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (224 aa)
	polr1c	DNA-directed RNA polymerases I and III subunit RPAC1. (347 aa)

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103177281	polr1b	ENSCMIP00000008700	ENSCMIP00000034557	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.950
LOC103177281	polr1c	ENSCMIP00000008700	ENSCMIP00000043677	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.987
LOC103177281	polr1e	ENSCMIP00000008700	ENSCMIP00000016944	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	Uncharacterized protein.	0.965
LOC103177281	polr2b	ENSCMIP00000008700	ENSCMIP00000038862	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.894
LOC103177281	polr2c	ENSCMIP00000008700	ENSCMIP00000008812	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	RPOLD domain-containing protein.	0.971
LOC103177281	polr2d	ENSCMIP00000008700	ENSCMIP00000031837	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	RPOL4c domain-containing protein.	0.562
LOC103177281	polr2e	ENSCMIP00000008700	ENSCMIP00000027487	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	Uncharacterized protein.	0.988
LOC103177281	polr2f	ENSCMIP00000008700	ENSCMIP00000026897	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	Uncharacterized protein.	0.984
LOC103177281	polr2g	ENSCMIP00000008700	ENSCMIP00000002393	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	Uncharacterized protein.	0.469
LOC103177281	polr2h	ENSCMIP00000008700	ENSCMIP00000023257	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.987
LOC103177281	polr3a	ENSCMIP00000008700	ENSCMIP00000011577	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.972
LOC103177281	polr3b	ENSCMIP00000008700	ENSCMIP00000032437	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.965
LOC103177281	polr3e	ENSCMIP00000008700	ENSCMIP00000014893	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	Uncharacterized protein.	0.942
LOC103177281	polr3f	ENSCMIP00000008700	ENSCMIP00000015515	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.973
LOC103177281	polr3g	ENSCMIP00000008700	ENSCMIP00000040397	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.968
LOC103177281	polr3h	ENSCMIP00000008700	ENSCMIP00000009809	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	Uncharacterized protein.	0.977
LOC103177281	twistnb	ENSCMIP00000008700	ENSCMIP00000012640	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	Uncharacterized protein.	0.974
polr1b	LOC103177281	ENSCMIP00000034557	ENSCMIP00000008700	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I and III subunit RPAC2-like protein.	0.950
polr1b	polr1c	ENSCMIP00000034557	ENSCMIP00000043677	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.999
polr1b	polr1e	ENSCMIP00000034557	ENSCMIP00000016944	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999