(8 nodes) EPM2A-interacting protein 1/ZBED8-like network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2ZVL6_LATCH	Dimer_Tnp_hAT domain-containing protein. (465 aa)
	H3A1Q4_LATCH	Uncharacterized protein. (165 aa)
	H3A711_LATCH	Uncharacterized protein. (446 aa)
	H3AC63_LATCH	Uncharacterized protein. (472 aa)
	H3ALC5_LATCH	Uncharacterized protein. (537 aa)
	H3ASZ0_LATCH	Uncharacterized protein. (205 aa)
	H3B6H7_LATCH	Dimer_Tnp_hAT domain-containing protein. (246 aa)
	H3B749_LATCH	Uncharacterized protein. (360 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2ZVL6_LATCH	H3A1Q4_LATCH	ENSLACP00000001437	ENSLACP00000003575	Dimer_Tnp_hAT domain-containing protein.	Uncharacterized protein.	0.515
H2ZVL6_LATCH	H3B749_LATCH	ENSLACP00000001437	ENSLACP00000017720	Dimer_Tnp_hAT domain-containing protein.	Uncharacterized protein.	0.506
H3A1Q4_LATCH	H2ZVL6_LATCH	ENSLACP00000003575	ENSLACP00000001437	Uncharacterized protein.	Dimer_Tnp_hAT domain-containing protein.	0.515
H3A1Q4_LATCH	H3A711_LATCH	ENSLACP00000003575	ENSLACP00000005432	Uncharacterized protein.	Uncharacterized protein.	0.531
H3A1Q4_LATCH	H3AC63_LATCH	ENSLACP00000003575	ENSLACP00000007234	Uncharacterized protein.	Uncharacterized protein.	0.514
H3A1Q4_LATCH	H3ASZ0_LATCH	ENSLACP00000003575	ENSLACP00000012761	Uncharacterized protein.	Uncharacterized protein.	0.488
H3A1Q4_LATCH	H3B6H7_LATCH	ENSLACP00000003575	ENSLACP00000017498	Uncharacterized protein.	Dimer_Tnp_hAT domain-containing protein.	0.454
H3A711_LATCH	H3A1Q4_LATCH	ENSLACP00000005432	ENSLACP00000003575	Uncharacterized protein.	Uncharacterized protein.	0.531
H3A711_LATCH	H3AC63_LATCH	ENSLACP00000005432	ENSLACP00000007234	Uncharacterized protein.	Uncharacterized protein.	0.475
H3A711_LATCH	H3ASZ0_LATCH	ENSLACP00000005432	ENSLACP00000012761	Uncharacterized protein.	Uncharacterized protein.	0.498
H3A711_LATCH	H3B6H7_LATCH	ENSLACP00000005432	ENSLACP00000017498	Uncharacterized protein.	Dimer_Tnp_hAT domain-containing protein.	0.458
H3AC63_LATCH	H3A1Q4_LATCH	ENSLACP00000007234	ENSLACP00000003575	Uncharacterized protein.	Uncharacterized protein.	0.514
H3AC63_LATCH	H3A711_LATCH	ENSLACP00000007234	ENSLACP00000005432	Uncharacterized protein.	Uncharacterized protein.	0.475
H3AC63_LATCH	H3B749_LATCH	ENSLACP00000007234	ENSLACP00000017720	Uncharacterized protein.	Uncharacterized protein.	0.455
H3ALC5_LATCH	H3ASZ0_LATCH	ENSLACP00000010446	ENSLACP00000012761	Uncharacterized protein.	Uncharacterized protein.	0.500
H3ASZ0_LATCH	H3A1Q4_LATCH	ENSLACP00000012761	ENSLACP00000003575	Uncharacterized protein.	Uncharacterized protein.	0.488
H3ASZ0_LATCH	H3A711_LATCH	ENSLACP00000012761	ENSLACP00000005432	Uncharacterized protein.	Uncharacterized protein.	0.498
H3ASZ0_LATCH	H3ALC5_LATCH	ENSLACP00000012761	ENSLACP00000010446	Uncharacterized protein.	Uncharacterized protein.	0.500
H3ASZ0_LATCH	H3B749_LATCH	ENSLACP00000012761	ENSLACP00000017720	Uncharacterized protein.	Uncharacterized protein.	0.469
H3B6H7_LATCH	H3A1Q4_LATCH	ENSLACP00000017498	ENSLACP00000003575	Dimer_Tnp_hAT domain-containing protein.	Uncharacterized protein.	0.454