(5 nodes) SPIN-DOC-like, zinc-finger, and Positive regulation of glycogen metabolic process network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3A0C4_LATCH	Uncharacterized protein. (204 aa)
	H3ABK8_LATCH	DUF4371 domain-containing protein. (299 aa)
	H3AEH0_LATCH	Uncharacterized protein. (250 aa)
	H3AFG3_LATCH	Dimer_Tnp_hAT domain-containing protein. (202 aa)
	H3AFH7_LATCH	Uncharacterized protein. (364 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3A0C4_LATCH	H3ABK8_LATCH	ENSLACP00000003095	ENSLACP00000007029	Uncharacterized protein.	DUF4371 domain-containing protein.	0.435
H3A0C4_LATCH	H3AFH7_LATCH	ENSLACP00000003095	ENSLACP00000008398	Uncharacterized protein.	Uncharacterized protein.	0.501
H3ABK8_LATCH	H3A0C4_LATCH	ENSLACP00000007029	ENSLACP00000003095	DUF4371 domain-containing protein.	Uncharacterized protein.	0.435
H3ABK8_LATCH	H3AEH0_LATCH	ENSLACP00000007029	ENSLACP00000008041	DUF4371 domain-containing protein.	Uncharacterized protein.	0.411
H3ABK8_LATCH	H3AFG3_LATCH	ENSLACP00000007029	ENSLACP00000008384	DUF4371 domain-containing protein.	Dimer_Tnp_hAT domain-containing protein.	0.441
H3AEH0_LATCH	H3ABK8_LATCH	ENSLACP00000008041	ENSLACP00000007029	Uncharacterized protein.	DUF4371 domain-containing protein.	0.411
H3AEH0_LATCH	H3AFH7_LATCH	ENSLACP00000008041	ENSLACP00000008398	Uncharacterized protein.	Uncharacterized protein.	0.407
H3AFG3_LATCH	H3ABK8_LATCH	ENSLACP00000008384	ENSLACP00000007029	Dimer_Tnp_hAT domain-containing protein.	DUF4371 domain-containing protein.	0.441
H3AFH7_LATCH	H3A0C4_LATCH	ENSLACP00000008398	ENSLACP00000003095	Uncharacterized protein.	Uncharacterized protein.	0.501
H3AFH7_LATCH	H3AEH0_LATCH	ENSLACP00000008398	ENSLACP00000008041	Uncharacterized protein.	Uncharacterized protein.	0.407