STRINGSTRING
EEA1 EEA1 LOC102366232 LOC102366232 RAB5C RAB5C ALS2 ALS2 GAPVD1 GAPVD1 RAB5B RAB5B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EEA1Early endosome antigen 1. (1412 aa)
LOC102366232RAB5B, member RAS oncogene family. (213 aa)
RAB5CRAB5C, member RAS oncogene family. (216 aa)
ALS2Alsin Rho guanine nucleotide exchange factor ALS2. (1678 aa)
GAPVD1GTPase activating protein and VPS9 domains 1. (1463 aa)
RAB5BRAB5B, member RAS oncogene family. (229 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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