(20 nodes) Catenin complex, and Vinculin family network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDH8	Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins. (713 aa)
	CDH12	Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins. (727 aa)
	CTNNA3	Uncharacterized protein. (213 aa)
	CDH4	Cadherin 4; Cadherins are calcium-dependent cell adhesion proteins. (724 aa)
	CDH11	Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins. (800 aa)
	CDH1	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (829 aa)
	JUP	Junction plakoglobin. (694 aa)
	LOC102346231	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (714 aa)
	H3ARS9_LATCH	Uncharacterized protein. (86 aa)
	CDH5	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (772 aa)
	CDH16	Cadherin 16, KSP-cadherin. (839 aa)
	H3AU51_LATCH	Uncharacterized protein. (706 aa)
	CTNND2	Uncharacterized protein. (368 aa)
	H3B296_LATCH	Uncharacterized protein. (380 aa)
	CDH7	Cadherin 7; Cadherins are calcium-dependent cell adhesion proteins. (785 aa)
	H3B4B5_LATCH	Uncharacterized protein. (534 aa)
	ARVCF	ARVCF delta catenin family member. (870 aa)
	M3XIR5_LATCH	Uncharacterized protein. (217 aa)
	CDH2	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (894 aa)
	PKP4	Plakophilin 4. (1190 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARVCF	CDH1	ENSLACP00000019051	ENSLACP00000006055	ARVCF delta catenin family member.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.832
ARVCF	CDH11	ENSLACP00000019051	ENSLACP00000005664	ARVCF delta catenin family member.	Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins.	0.662
ARVCF	CDH12	ENSLACP00000019051	ENSLACP00000003276	ARVCF delta catenin family member.	Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.	0.619
ARVCF	CDH16	ENSLACP00000019051	ENSLACP00000013008	ARVCF delta catenin family member.	Cadherin 16, KSP-cadherin.	0.678
ARVCF	CDH2	ENSLACP00000019051	ENSLACP00000022733	ARVCF delta catenin family member.	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.681
ARVCF	CDH4	ENSLACP00000019051	ENSLACP00000004699	ARVCF delta catenin family member.	Cadherin 4; Cadherins are calcium-dependent cell adhesion proteins.	0.681
ARVCF	CDH5	ENSLACP00000019051	ENSLACP00000012760	ARVCF delta catenin family member.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.831
ARVCF	CDH7	ENSLACP00000019051	ENSLACP00000016501	ARVCF delta catenin family member.	Cadherin 7; Cadherins are calcium-dependent cell adhesion proteins.	0.644
ARVCF	CDH8	ENSLACP00000019051	ENSLACP00000001253	ARVCF delta catenin family member.	Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.	0.644
ARVCF	CTNNA3	ENSLACP00000019051	ENSLACP00000004684	ARVCF delta catenin family member.	Uncharacterized protein.	0.699
ARVCF	CTNND2	ENSLACP00000019051	ENSLACP00000013244	ARVCF delta catenin family member.	Uncharacterized protein.	0.877
ARVCF	H3ARS9_LATCH	ENSLACP00000019051	ENSLACP00000012350	ARVCF delta catenin family member.	Uncharacterized protein.	0.699
ARVCF	H3AU51_LATCH	ENSLACP00000019051	ENSLACP00000013172	ARVCF delta catenin family member.	Uncharacterized protein.	0.699
ARVCF	H3B296_LATCH	ENSLACP00000019051	ENSLACP00000016017	ARVCF delta catenin family member.	Uncharacterized protein.	0.699
ARVCF	JUP	ENSLACP00000019051	ENSLACP00000006244	ARVCF delta catenin family member.	Junction plakoglobin.	0.787
ARVCF	LOC102346231	ENSLACP00000019051	ENSLACP00000007362	ARVCF delta catenin family member.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.569
ARVCF	M3XIR5_LATCH	ENSLACP00000019051	ENSLACP00000022621	ARVCF delta catenin family member.	Uncharacterized protein.	0.555
CDH1	ARVCF	ENSLACP00000006055	ENSLACP00000019051	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	ARVCF delta catenin family member.	0.832
CDH1	CDH11	ENSLACP00000006055	ENSLACP00000005664	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins.	0.589
CDH1	CDH12	ENSLACP00000006055	ENSLACP00000003276	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.	0.566