(26 nodes) ABC transporter-like, ATP-binding domain network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABCB11	ATP binding cassette subfamily B member 11. (594 aa)
	ABCG2	ABC transporter domain-containing protein. (607 aa)
	H2ZZE6_LATCH	ATP-binding cassette, sub-family C (CFTR/MRP), member 10. (1490 aa)
	ABCB7	ATP binding cassette subfamily B member 7. (748 aa)
	LOC102365982	Uncharacterized protein. (439 aa)
	ABCG1	ATP binding cassette subfamily G member 1. (649 aa)
	H3A5I8_LATCH	ABC transporter domain-containing protein. (665 aa)
	ABCF1	ATP binding cassette subfamily F member 1. (908 aa)
	H3AES0_LATCH	ATP-binding cassette, sub-family C (CFTR/MRP), member 3. (1035 aa)
	H3AIJ4_LATCH	Uncharacterized protein. (1107 aa)
	ABCB8	ATP binding cassette subfamily B member 8. (716 aa)
	ABCA1	ATP binding cassette subfamily A member 1. (2267 aa)
	LOC102361283	ATP-binding cassette, sub-family G (WHITE), member 2b. (634 aa)
	ABCA12	ATP binding cassette subfamily A member 12. (2171 aa)
	LOC102355229	Uncharacterized protein. (1401 aa)
	ABCA7	Uncharacterized protein. (2267 aa)
	ABCG8	ATP binding cassette subfamily G member 8. (677 aa)
	ABCA5	ATP binding cassette subfamily A member 5. (1627 aa)
	H3B6Y9_LATCH	ATP-binding cassette, sub-family H, member 1. (789 aa)
	ABCC5	ATP binding cassette subfamily C member 5. (1433 aa)
	ABCG5	ATP binding cassette subfamily G member 5. (438 aa)
	LOC102359288	Potassium inwardly-rectifying channel, subfamily J, member 11, like. (370 aa)
	H3BD64_LATCH	Xenotropic and polytropic retrovirus receptor 1b. (669 aa)
	LOC102361847	Uncharacterized protein. (517 aa)
	H3BHK5_LATCH	Mannosyltransferase. (563 aa)
	ABCC12	ATP binding cassette subfamily C member 12. (1270 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA1	ABCA7	ENSLACP00000009885	ENSLACP00000016775	ATP binding cassette subfamily A member 1.	Uncharacterized protein.	0.903
ABCA1	ABCC5	ENSLACP00000009885	ENSLACP00000017733	ATP binding cassette subfamily A member 1.	ATP binding cassette subfamily C member 5.	0.573
ABCA1	ABCG5	ENSLACP00000009885	ENSLACP00000017950	ATP binding cassette subfamily A member 1.	ATP binding cassette subfamily G member 5.	0.542
ABCA1	LOC102361847	ENSLACP00000009885	ENSLACP00000021031	ATP binding cassette subfamily A member 1.	Uncharacterized protein.	0.405
ABCA12	ABCA5	ENSLACP00000016181	ENSLACP00000017466	ATP binding cassette subfamily A member 12.	ATP binding cassette subfamily A member 5.	0.458
ABCA12	ABCB7	ENSLACP00000016181	ENSLACP00000002931	ATP binding cassette subfamily A member 12.	ATP binding cassette subfamily B member 7.	0.475
ABCA12	ABCC12	ENSLACP00000016181	ENSLACP00000022774	ATP binding cassette subfamily A member 12.	ATP binding cassette subfamily C member 12.	0.639
ABCA12	ABCC5	ENSLACP00000016181	ENSLACP00000017733	ATP binding cassette subfamily A member 12.	ATP binding cassette subfamily C member 5.	0.563
ABCA12	ABCF1	ENSLACP00000016181	ENSLACP00000005750	ATP binding cassette subfamily A member 12.	ATP binding cassette subfamily F member 1.	0.449
ABCA12	H2ZZE6_LATCH	ENSLACP00000016181	ENSLACP00000002767	ATP binding cassette subfamily A member 12.	ATP-binding cassette, sub-family C (CFTR/MRP), member 10.	0.441
ABCA5	ABCA12	ENSLACP00000017466	ENSLACP00000016181	ATP binding cassette subfamily A member 5.	ATP binding cassette subfamily A member 12.	0.458
ABCA5	ABCC12	ENSLACP00000017466	ENSLACP00000022774	ATP binding cassette subfamily A member 5.	ATP binding cassette subfamily C member 12.	0.432
ABCA5	ABCC5	ENSLACP00000017466	ENSLACP00000017733	ATP binding cassette subfamily A member 5.	ATP binding cassette subfamily C member 5.	0.418
ABCA5	H2ZZE6_LATCH	ENSLACP00000017466	ENSLACP00000002767	ATP binding cassette subfamily A member 5.	ATP-binding cassette, sub-family C (CFTR/MRP), member 10.	0.438
ABCA7	ABCA1	ENSLACP00000016775	ENSLACP00000009885	Uncharacterized protein.	ATP binding cassette subfamily A member 1.	0.903
ABCA7	ABCC12	ENSLACP00000016775	ENSLACP00000022774	Uncharacterized protein.	ATP binding cassette subfamily C member 12.	0.607
ABCA7	ABCC5	ENSLACP00000016775	ENSLACP00000017733	Uncharacterized protein.	ATP binding cassette subfamily C member 5.	0.530
ABCA7	LOC102361847	ENSLACP00000016775	ENSLACP00000021031	Uncharacterized protein.	Uncharacterized protein.	0.405
ABCB11	ABCB7	ENSLACP00000000141	ENSLACP00000002931	ATP binding cassette subfamily B member 11.	ATP binding cassette subfamily B member 7.	0.618
ABCB11	ABCC12	ENSLACP00000000141	ENSLACP00000022774	ATP binding cassette subfamily B member 11.	ATP binding cassette subfamily C member 12.	0.463