(11 nodes) L-cystine transport, and Tryptophan transport network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC7A13	Uncharacterized protein. (270 aa)
	H3A9B7_LATCH	Uncharacterized protein. (521 aa)
	H3AEZ9_LATCH	Uncharacterized protein. (491 aa)
	LOC102354610	Zmp:0000001267. (490 aa)
	SLC7A11	Solute carrier family 7 member 11. (501 aa)
	SLC3A1	Solute carrier family 3 member 1. (681 aa)
	LOC102353411	Uncharacterized protein. (491 aa)
	SLC1A2	Amino acid transporter. (566 aa)
	SLC7A5	Solute carrier family 7 member 5. (522 aa)
	SLC7A3	Solute carrier family 7 member 3. (634 aa)
	LOC102352322	Aamy domain-containing protein. (520 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3A9B7_LATCH	H3AEZ9_LATCH	ENSLACP00000006238	ENSLACP00000008220	Uncharacterized protein.	Uncharacterized protein.	0.765
H3A9B7_LATCH	LOC102353411	ENSLACP00000006238	ENSLACP00000013468	Uncharacterized protein.	Uncharacterized protein.	0.765
H3A9B7_LATCH	LOC102354610	ENSLACP00000006238	ENSLACP00000009240	Uncharacterized protein.	Zmp:0000001267.	0.765
H3A9B7_LATCH	SLC1A2	ENSLACP00000006238	ENSLACP00000013672	Uncharacterized protein.	Amino acid transporter.	0.602
H3A9B7_LATCH	SLC3A1	ENSLACP00000006238	ENSLACP00000011899	Uncharacterized protein.	Solute carrier family 3 member 1.	0.482
H3A9B7_LATCH	SLC7A11	ENSLACP00000006238	ENSLACP00000010600	Uncharacterized protein.	Solute carrier family 7 member 11.	0.968
H3A9B7_LATCH	SLC7A13	ENSLACP00000006238	ENSLACP00000004203	Uncharacterized protein.	Uncharacterized protein.	0.732
H3A9B7_LATCH	SLC7A3	ENSLACP00000006238	ENSLACP00000016608	Uncharacterized protein.	Solute carrier family 7 member 3.	0.440
H3A9B7_LATCH	SLC7A5	ENSLACP00000006238	ENSLACP00000016597	Uncharacterized protein.	Solute carrier family 7 member 5.	0.975
H3AEZ9_LATCH	H3A9B7_LATCH	ENSLACP00000008220	ENSLACP00000006238	Uncharacterized protein.	Uncharacterized protein.	0.765
H3AEZ9_LATCH	LOC102352322	ENSLACP00000008220	ENSLACP00000023504	Uncharacterized protein.	Aamy domain-containing protein.	0.765
H3AEZ9_LATCH	SLC3A1	ENSLACP00000008220	ENSLACP00000011899	Uncharacterized protein.	Solute carrier family 3 member 1.	0.930
LOC102352322	H3AEZ9_LATCH	ENSLACP00000023504	ENSLACP00000008220	Aamy domain-containing protein.	Uncharacterized protein.	0.765
LOC102352322	LOC102353411	ENSLACP00000023504	ENSLACP00000013468	Aamy domain-containing protein.	Uncharacterized protein.	0.765
LOC102352322	LOC102354610	ENSLACP00000023504	ENSLACP00000009240	Aamy domain-containing protein.	Zmp:0000001267.	0.765
LOC102352322	SLC1A2	ENSLACP00000023504	ENSLACP00000013672	Aamy domain-containing protein.	Amino acid transporter.	0.498
LOC102352322	SLC7A11	ENSLACP00000023504	ENSLACP00000010600	Aamy domain-containing protein.	Solute carrier family 7 member 11.	0.996
LOC102352322	SLC7A13	ENSLACP00000023504	ENSLACP00000004203	Aamy domain-containing protein.	Uncharacterized protein.	0.732
LOC102352322	SLC7A3	ENSLACP00000023504	ENSLACP00000016608	Aamy domain-containing protein.	Solute carrier family 7 member 3.	0.440
LOC102352322	SLC7A5	ENSLACP00000023504	ENSLACP00000016597	Aamy domain-containing protein.	Solute carrier family 7 member 5.	0.997