(47 nodes) Mixed, incl. O-glycosylation of TSR domain-containing proteins, and RSBN1/Dpy-21 network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FUCA2	Alpha-L-fucosidase 2. (384 aa)
	LOC102350769	ADAM metallopeptidase domain 19a. (620 aa)
	ADAMTS9	ADAM metallopeptidase with thrombospondin type 1 motif 9. (1867 aa)
	SPON1	Spondin 1. (682 aa)
	LOC102363464	Si:ch211-267e7.3. (924 aa)
	ADAMTS18	ADAM metallopeptidase with thrombospondin type 1 motif 18. (1173 aa)
	B3GLCT	Beta 3-glucosyltransferase. (502 aa)
	LY75	Uncharacterized protein. (1730 aa)
	LRP11	Uncharacterized protein. (400 aa)
	MYBPC1	Myosin binding protein C, slow type. (1127 aa)
	H3A4S8_LATCH	Uncharacterized protein. (2030 aa)
	H3A846_LATCH	Uncharacterized protein. (628 aa)
	ADAMTSL5	ADAMTS like 5. (462 aa)
	TBX22	T-box transcription factor 22. (509 aa)
	HIVEP2	Human immunodeficiency virus type I enhancer binding protein 2. (2438 aa)
	RSBN1L	Round spermatid basic protein 1 like. (655 aa)
	GPR84	G_PROTEIN_RECEP_F1_2 domain-containing protein. (379 aa)
	ADAMTSL4	ADAMTS like 4. (1086 aa)
	TET3	Tet methylcytosine dioxygenase 3. (1688 aa)
	ADAMTS19	ADAM metallopeptidase with thrombospondin type 1 motif 19. (735 aa)
	ADAMTS10	ADAM metallopeptidase with thrombospondin type 1 motif 10. (1112 aa)
	SLC22A31	Solute carrier family 22 member 31. (600 aa)
	SWT1	SWT1 RNA endoribonuclease homolog. (696 aa)
	TRIM14	Tripartite motif containing 14. (523 aa)
	SLC22A23	Solute carrier family 22 member 23. (388 aa)
	IRX3	Iroquois homeobox 3. (447 aa)
	ADAMTS12	Peptidase M12B domain-containing protein. (1187 aa)
	KIF1B	Kinesin family member 1B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1783 aa)
	ADAMTS7	ADAM metallopeptidase with thrombospondin type 1 motif 7. (1594 aa)
	ADAMTS20	ADAM metallopeptidase with thrombospondin type 1 motif 20. (1713 aa)
	H3B3T5_LATCH	ADAMTS like 5. (494 aa)
	TET1	Tet methylcytosine dioxygenase 1. (1502 aa)
	H3B4Z2_LATCH	Pep_M12B_propep domain-containing protein. (169 aa)
	SCUBE3	Signal peptide, CUB domain and EGF like domain containing 3. (958 aa)
	HIVEP3	Human immunodeficiency virus type I enhancer binding protein 3. (2419 aa)
	RSBN1	Round spermatid basic protein 1. (677 aa)
	ADAMTSL3	ADAMTS like 3. (1699 aa)
	TSPO	Translocator protein. (164 aa)
	ADAMTS17	ADAM metallopeptidase with thrombospondin type 1 motif 17. (911 aa)
	SCUBE2	Signal peptide, CUB domain and EGF like domain containing 2. (991 aa)
	C2orf42	Chromosome 2 open reading frame 42. (574 aa)
	LGALS4	Galectin. (329 aa)
	H3BHJ9_LATCH	Uncharacterized protein. (335 aa)
	THSD4	Thrombospondin type 1 domain containing 4. (546 aa)
	PHTF1	Putative homeodomain transcription factor 1. (768 aa)
	LOC102367579	Translocator protein 2. (163 aa)
	HHAT	Hedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family. (413 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADAMTS10	B3GLCT	ENSLACP00000009899	ENSLACP00000002988	ADAM metallopeptidase with thrombospondin type 1 motif 10.	Beta 3-glucosyltransferase.	0.488
ADAMTS12	B3GLCT	ENSLACP00000013711	ENSLACP00000002988	Peptidase M12B domain-containing protein.	Beta 3-glucosyltransferase.	0.527
ADAMTS12	H3B4Z2_LATCH	ENSLACP00000013711	ENSLACP00000016963	Peptidase M12B domain-containing protein.	Pep_M12B_propep domain-containing protein.	0.899
ADAMTS17	B3GLCT	ENSLACP00000019600	ENSLACP00000002988	ADAM metallopeptidase with thrombospondin type 1 motif 17.	Beta 3-glucosyltransferase.	0.461
ADAMTS18	B3GLCT	ENSLACP00000001832	ENSLACP00000002988	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Beta 3-glucosyltransferase.	0.608
ADAMTS18	GPR84	ENSLACP00000001832	ENSLACP00000009167	ADAM metallopeptidase with thrombospondin type 1 motif 18.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.695
ADAMTS18	H3A4S8_LATCH	ENSLACP00000001832	ENSLACP00000004649	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Uncharacterized protein.	0.453
ADAMTS18	HIVEP2	ENSLACP00000001832	ENSLACP00000007462	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Human immunodeficiency virus type I enhancer binding protein 2.	0.543
ADAMTS18	HIVEP3	ENSLACP00000001832	ENSLACP00000018200	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Human immunodeficiency virus type I enhancer binding protein 3.	0.700
ADAMTS18	IRX3	ENSLACP00000001832	ENSLACP00000013396	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Iroquois homeobox 3.	0.687
ADAMTS18	LRP11	ENSLACP00000001832	ENSLACP00000003780	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Uncharacterized protein.	0.402
ADAMTS18	SCUBE2	ENSLACP00000001832	ENSLACP00000019644	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Signal peptide, CUB domain and EGF like domain containing 2.	0.505
ADAMTS18	SCUBE3	ENSLACP00000001832	ENSLACP00000017028	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Signal peptide, CUB domain and EGF like domain containing 3.	0.505
ADAMTS18	TET1	ENSLACP00000001832	ENSLACP00000016889	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Tet methylcytosine dioxygenase 1.	0.429
ADAMTS18	TET3	ENSLACP00000001832	ENSLACP00000009535	ADAM metallopeptidase with thrombospondin type 1 motif 18.	Tet methylcytosine dioxygenase 3.	0.429
ADAMTS19	B3GLCT	ENSLACP00000009568	ENSLACP00000002988	ADAM metallopeptidase with thrombospondin type 1 motif 19.	Beta 3-glucosyltransferase.	0.461
ADAMTS19	H3B4Z2_LATCH	ENSLACP00000009568	ENSLACP00000016963	ADAM metallopeptidase with thrombospondin type 1 motif 19.	Pep_M12B_propep domain-containing protein.	0.512
ADAMTS20	B3GLCT	ENSLACP00000016519	ENSLACP00000002988	ADAM metallopeptidase with thrombospondin type 1 motif 20.	Beta 3-glucosyltransferase.	0.491
ADAMTS7	B3GLCT	ENSLACP00000015874	ENSLACP00000002988	ADAM metallopeptidase with thrombospondin type 1 motif 7.	Beta 3-glucosyltransferase.	0.425
ADAMTS9	B3GLCT	ENSLACP00000000365	ENSLACP00000002988	ADAM metallopeptidase with thrombospondin type 1 motif 9.	Beta 3-glucosyltransferase.	0.491