(18 nodes) Mixed, incl. 5 nucleotidase family, and Protein LRATD1/ LRATD2 network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ITFG1	Integrin alpha FG-GAP repeat containing 1. (441 aa)
	ANGPTL6	Fibrinogen C-terminal domain-containing protein. (519 aa)
	NT5DC3	5'-nucleotidase domain containing 3. (472 aa)
	SMIM4	Small integral membrane protein 4. (84 aa)
	ZBTB46	Zinc finger and BTB domain containing 46. (597 aa)
	LRATD1	LRAT domain containing 1. (265 aa)
	ANKRD55	Ankyrin repeat domain 55. (661 aa)
	S1PR2	Sphingosine-1-phosphate receptor 2. (352 aa)
	ZBTB24	Zinc finger and BTB domain containing 24. (451 aa)
	LOC102350904	5'-nucleotidase domain containing 2. (600 aa)
	ABHD1	Abhydrolase domain containing 1. (389 aa)
	FNDC3B	Fibronectin type III domain containing 3B. (944 aa)
	LOC102351578	Family with sequence similarity 49 member A, like. (324 aa)
	API5	Apoptosis inhibitor 5. (533 aa)
	B4GALT5	Beta-1,4-galactosyltransferase 5. (340 aa)
	SOGA1	Suppressor of glucose, autophagy associated 1. (1651 aa)
	PPM1M	Protein phosphatase, Mg2+/Mn2+ dependent 1M. (462 aa)
	NT5DC2	5'-nucleotidase domain containing 2. (552 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABHD1	B4GALT5	ENSLACP00000016043	ENSLACP00000019575	Abhydrolase domain containing 1.	Beta-1,4-galactosyltransferase 5.	0.655
ABHD1	ZBTB24	ENSLACP00000016043	ENSLACP00000013013	Abhydrolase domain containing 1.	Zinc finger and BTB domain containing 24.	0.651
ABHD1	ZBTB46	ENSLACP00000016043	ENSLACP00000004105	Abhydrolase domain containing 1.	Zinc finger and BTB domain containing 46.	0.571
ANGPTL6	S1PR2	ENSLACP00000001819	ENSLACP00000009721	Fibrinogen C-terminal domain-containing protein.	Sphingosine-1-phosphate receptor 2.	0.543
ANKRD55	FNDC3B	ENSLACP00000006742	ENSLACP00000016067	Ankyrin repeat domain 55.	Fibronectin type III domain containing 3B.	0.401
ANKRD55	LRATD1	ENSLACP00000006742	ENSLACP00000004833	Ankyrin repeat domain 55.	LRAT domain containing 1.	0.598
API5	FNDC3B	ENSLACP00000018859	ENSLACP00000016067	Apoptosis inhibitor 5.	Fibronectin type III domain containing 3B.	0.540
API5	NT5DC3	ENSLACP00000018859	ENSLACP00000002076	Apoptosis inhibitor 5.	5'-nucleotidase domain containing 3.	0.600
B4GALT5	ABHD1	ENSLACP00000019575	ENSLACP00000016043	Beta-1,4-galactosyltransferase 5.	Abhydrolase domain containing 1.	0.655
B4GALT5	ZBTB24	ENSLACP00000019575	ENSLACP00000013013	Beta-1,4-galactosyltransferase 5.	Zinc finger and BTB domain containing 24.	0.666
B4GALT5	ZBTB46	ENSLACP00000019575	ENSLACP00000004105	Beta-1,4-galactosyltransferase 5.	Zinc finger and BTB domain containing 46.	0.571
FNDC3B	ANKRD55	ENSLACP00000016067	ENSLACP00000006742	Fibronectin type III domain containing 3B.	Ankyrin repeat domain 55.	0.401
FNDC3B	API5	ENSLACP00000016067	ENSLACP00000018859	Fibronectin type III domain containing 3B.	Apoptosis inhibitor 5.	0.540
ITFG1	SOGA1	ENSLACP00000001307	ENSLACP00000020909	Integrin alpha FG-GAP repeat containing 1.	Suppressor of glucose, autophagy associated 1.	0.556
LOC102351578	LRATD1	ENSLACP00000016122	ENSLACP00000004833	Family with sequence similarity 49 member A, like.	LRAT domain containing 1.	0.420
LRATD1	ANKRD55	ENSLACP00000004833	ENSLACP00000006742	LRAT domain containing 1.	Ankyrin repeat domain 55.	0.598
LRATD1	LOC102351578	ENSLACP00000004833	ENSLACP00000016122	LRAT domain containing 1.	Family with sequence similarity 49 member A, like.	0.420
NT5DC3	API5	ENSLACP00000002076	ENSLACP00000018859	5'-nucleotidase domain containing 3.	Apoptosis inhibitor 5.	0.600
S1PR2	ANGPTL6	ENSLACP00000009721	ENSLACP00000001819	Sphingosine-1-phosphate receptor 2.	Fibrinogen C-terminal domain-containing protein.	0.543
SOGA1	ITFG1	ENSLACP00000020909	ENSLACP00000001307	Suppressor of glucose, autophagy associated 1.	Integrin alpha FG-GAP repeat containing 1.	0.556