STRINGSTRING
USB1 USB1 ZNHIT2 ZNHIT2 CD2BP2 CD2BP2 GPATCH1 GPATCH1 ECD ECD LTN1 LTN1 ZNF598 ZNF598 TCF25 TCF25 WDR83 WDR83 AAR2 AAR2 H3AWC7_LATCH H3AWC7_LATCH ANKZF1 ANKZF1 TRIP4 TRIP4 TSSC4 TSSC4 ASCC3 ASCC3 NEMF NEMF EAPP EAPP ASCC1 ASCC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (289 aa)
ZNHIT2Zinc finger HIT-type containing 2. (464 aa)
CD2BP2CD2 cytoplasmic tail binding protein 2. (297 aa)
GPATCH1G-patch domain containing 1. (910 aa)
ECDEcdysoneless cell cycle regulator. (636 aa)
LTN1Listerin E3 ubiquitin protein ligase 1. (1693 aa)
ZNF598Zinc finger protein 598. (872 aa)
TCF25Transcription factor 25. (701 aa)
WDR83WD repeat domain 83. (316 aa)
AAR2AAR2 splicing factor. (384 aa)
H3AWC7_LATCHHelicase ATP-binding domain-containing protein. (594 aa)
ANKZF1Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (731 aa)
TRIP4Thyroid hormone receptor interactor 4. (578 aa)
TSSC4Tumor suppressing subtransferable candidate 4. (350 aa)
ASCC3Activating signal cointegrator 1 complex subunit 3. (1030 aa)
NEMFNuclear export mediator factor. (1131 aa)
EAPPE2F associated phosphoprotein. (297 aa)
ASCC1Activating signal cointegrator 1 complex subunit 1. (354 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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