(7 nodes) mRNA regulatory element binding translation repressor activity network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SHMT2	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (542 aa)
	CPEB3	Cytoplasmic polyadenylation element binding protein 3. (684 aa)
	PAIP2	Poly(A) binding protein interacting protein 2. (127 aa)
	CPEB2	Uncharacterized protein. (313 aa)
	SHMT1	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (474 aa)
	CPEB4	Cytoplasmic polyadenylation element binding protein 4. (726 aa)
	H3BA50_LATCH	Cytoplasmic polyadenylation element binding protein 1b. (486 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPEB2	CPEB3	ENSLACP00000011397	ENSLACP00000012841	Uncharacterized protein.	Cytoplasmic polyadenylation element binding protein 3.	0.923
CPEB2	CPEB4	ENSLACP00000011397	ENSLACP00000018247	Uncharacterized protein.	Cytoplasmic polyadenylation element binding protein 4.	0.923
CPEB3	CPEB2	ENSLACP00000012841	ENSLACP00000011397	Cytoplasmic polyadenylation element binding protein 3.	Uncharacterized protein.	0.923
CPEB3	CPEB4	ENSLACP00000012841	ENSLACP00000018247	Cytoplasmic polyadenylation element binding protein 3.	Cytoplasmic polyadenylation element binding protein 4.	0.900
CPEB4	CPEB2	ENSLACP00000018247	ENSLACP00000011397	Cytoplasmic polyadenylation element binding protein 4.	Uncharacterized protein.	0.923
CPEB4	CPEB3	ENSLACP00000018247	ENSLACP00000012841	Cytoplasmic polyadenylation element binding protein 4.	Cytoplasmic polyadenylation element binding protein 3.	0.900