STRINGSTRING
LOC102354522 LOC102354522 AMT AMT LOC102346865 LOC102346865 SHMT2 SHMT2 PSPH PSPH SRR SRR LOC102360660 LOC102360660 LOC102346076 LOC102346076 THNSL1 THNSL1 H2ZS89_LATCH H2ZS89_LATCH SEPHS1 SEPHS1 GCLC GCLC DAO DAO CTH CTH SDSL SDSL AGXT2 AGXT2 LOC102345272 LOC102345272 TST TST HAO1 HAO1 GCSH GCSH SEPHS2 SEPHS2 AGXT AGXT DHFR DHFR CBS CBS GLDC GLDC SHMT1 SHMT1 THNSL2 THNSL2 SCLY SCLY LOC102360320 LOC102360320 GCLM GCLM H3B0I4_LATCH H3B0I4_LATCH PHGDH PHGDH CDO1 CDO1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102354522Zgc:162509. (550 aa)
AMTAminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (422 aa)
LOC102346865Threonine aldolase 1. (417 aa)
SHMT2Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (542 aa)
PSPHPhosphoserine phosphatase. (248 aa)
SRRSerine racemase. (337 aa)
LOC102360660Aminotran_5 domain-containing protein. (368 aa)
LOC102346076Aminotran_5 domain-containing protein. (349 aa)
THNSL1Threonine synthase like 1. (746 aa)
H2ZS89_LATCHUncharacterized protein. (189 aa)
SEPHS1Selenophosphate synthetase 1. (392 aa)
GCLCGlutamate-cysteine ligase catalytic subunit. (655 aa)
DAOD-amino acid oxidase. (347 aa)
CTHUncharacterized protein. (410 aa)
SDSLSerine dehydratase like. (325 aa)
AGXT2Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (516 aa)
LOC102345272Phosphoserine aminotransferase. (368 aa)
TSTSulfurtransferase. (301 aa)
HAO1Hydroxyacid oxidase 1. (370 aa)
GCSHGlycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (177 aa)
SEPHS2Selenophosphate synthetase 2. (338 aa)
AGXTSerine--pyruvate aminotransferase. (426 aa)
DHFRDihydrofolate reductase. (206 aa)
CBSCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (563 aa)
GLDCGlycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (914 aa)
SHMT1Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (474 aa)
THNSL2Threonine synthase like 2. (478 aa)
SCLYSelenocysteine lyase. (381 aa)
LOC102360320L-threonine dehydrogenase. (371 aa)
GCLMGlutamate-cysteine ligase modifier subunit. (274 aa)
H3B0I4_LATCHSi:ch73-263o4.3. (320 aa)
PHGDHPhosphoglycerate dehydrogenase. (522 aa)
CDO1Cysteine dioxygenase. (201 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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