(19 nodes) Response to fungus network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102359041	Zgc:153993. (208 aa)
	JAGN1	Jagunal homolog 1. (183 aa)
	SPON2	Spondin 2. (333 aa)
	LOC102353021	Uncharacterized protein. (644 aa)
	BAK1	BCL2 antagonist/killer 1. (239 aa)
	CARD9	Caspase recruitment domain family member 9. (567 aa)
	H3AQ96_LATCH	C-type lectin domain-containing protein. (122 aa)
	PLD2-2	Uncharacterized protein. (392 aa)
	H3AF25_LATCH	Uncharacterized protein. (117 aa)
	H2ZU28_LATCH	SEFIR domain-containing protein. (634 aa)
	PTX3	Uncharacterized protein. (423 aa)
	FAM3A	Family with sequence similarity 3 member A. (227 aa)
	COTL1	Coactosin like F-actin binding protein 1. (147 aa)
	H3B9K7_LATCH	SEFIR domain-containing protein. (774 aa)
	MYD88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (286 aa)
	ATG5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	MALT1	MALT1 paracaspase. (825 aa)
	H3B0U4_LATCH	MALT paracaspase 2. (695 aa)
	SYK	Tyrosine-protein kinase. (616 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAK1	LOC102359041	ENSLACP00000018296	ENSLACP00000012675	BCL2 antagonist/killer 1.	Zgc:153993.	0.900
CARD9	H3B0U4_LATCH	ENSLACP00000020146	ENSLACP00000015515	Caspase recruitment domain family member 9.	MALT paracaspase 2.	0.910
CARD9	LOC102353021	ENSLACP00000020146	ENSLACP00000018014	Caspase recruitment domain family member 9.	Uncharacterized protein.	0.888
CARD9	MALT1	ENSLACP00000020146	ENSLACP00000004155	Caspase recruitment domain family member 9.	MALT1 paracaspase.	0.910
CARD9	MYD88	ENSLACP00000020146	ENSLACP00000019094	Caspase recruitment domain family member 9.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.547
CARD9	SYK	ENSLACP00000020146	ENSLACP00000012982	Caspase recruitment domain family member 9.	Tyrosine-protein kinase.	0.970
H2ZU28_LATCH	H3AF25_LATCH	ENSLACP00000000899	ENSLACP00000008246	SEFIR domain-containing protein.	Uncharacterized protein.	0.947
H2ZU28_LATCH	H3B9K7_LATCH	ENSLACP00000000899	ENSLACP00000018578	SEFIR domain-containing protein.	SEFIR domain-containing protein.	0.884
H3AF25_LATCH	H2ZU28_LATCH	ENSLACP00000008246	ENSLACP00000000899	Uncharacterized protein.	SEFIR domain-containing protein.	0.947
H3AF25_LATCH	H3B9K7_LATCH	ENSLACP00000008246	ENSLACP00000018578	Uncharacterized protein.	SEFIR domain-containing protein.	0.808
H3AF25_LATCH	MYD88	ENSLACP00000008246	ENSLACP00000019094	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.488
H3B0U4_LATCH	CARD9	ENSLACP00000015515	ENSLACP00000020146	MALT paracaspase 2.	Caspase recruitment domain family member 9.	0.910
H3B0U4_LATCH	LOC102353021	ENSLACP00000015515	ENSLACP00000018014	MALT paracaspase 2.	Uncharacterized protein.	0.906
H3B0U4_LATCH	MALT1	ENSLACP00000015515	ENSLACP00000004155	MALT paracaspase 2.	MALT1 paracaspase.	0.902
H3B0U4_LATCH	SYK	ENSLACP00000015515	ENSLACP00000012982	MALT paracaspase 2.	Tyrosine-protein kinase.	0.469
H3B9K7_LATCH	H2ZU28_LATCH	ENSLACP00000018578	ENSLACP00000000899	SEFIR domain-containing protein.	SEFIR domain-containing protein.	0.884
H3B9K7_LATCH	H3AF25_LATCH	ENSLACP00000018578	ENSLACP00000008246	SEFIR domain-containing protein.	Uncharacterized protein.	0.808
LOC102353021	CARD9	ENSLACP00000018014	ENSLACP00000020146	Uncharacterized protein.	Caspase recruitment domain family member 9.	0.888
LOC102353021	H3B0U4_LATCH	ENSLACP00000018014	ENSLACP00000015515	Uncharacterized protein.	MALT paracaspase 2.	0.906
LOC102353021	MALT1	ENSLACP00000018014	ENSLACP00000004155	Uncharacterized protein.	MALT1 paracaspase.	0.902