STRINGSTRING
PDGFRB PDGFRB DDR2 DDR2 DOCK4 DOCK4 FOXO4 FOXO4 H3AM01_LATCH H3AM01_LATCH LOC102348760 LOC102348760 IGFBP5 IGFBP5 VTN VTN MDK MDK LOC102362765 LOC102362765 PDGFB PDGFB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDGFRBPlatelet derived growth factor receptor beta; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1103 aa)
DDR2Discoidin domain receptor tyrosine kinase 2. (838 aa)
DOCK4Dedicator of cytokinesis 4; Belongs to the DOCK family. (1826 aa)
FOXO4Forkhead box O4. (554 aa)
H3AM01_LATCHIntegrin beta; Belongs to the integrin beta chain family. (769 aa)
LOC102348760Uncharacterized protein. (782 aa)
IGFBP5Insulin like growth factor binding protein 5. (279 aa)
VTNVitronectin b. (492 aa)
MDKMidkine. (141 aa)
LOC102362765Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (537 aa)
PDGFBPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (209 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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