(20 nodes) Cation:chloride symporter activity network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC12A2	Solute carrier family 12 member 2. (1179 aa)
	LOC102348624	Solute carrier family 12 member 10, tandem duplicate 3. (1008 aa)
	SLC6A3	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (624 aa)
	SLC12A4	Uncharacterized protein. (1056 aa)
	SLC12A8	Solute carrier family 12 member 8. (716 aa)
	LOC102364761	Uncharacterized protein. (974 aa)
	LOC102355428	Uncharacterized protein. (949 aa)
	SLC12A5	Uncharacterized protein. (951 aa)
	SLC12A1	Solute carrier family 12 member 1. (1102 aa)
	LOC102367330	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (616 aa)
	H3APG2_LATCH	Uncharacterized protein. (66 aa)
	SLC12A3	Solute carrier family 12 member 3. (1040 aa)
	SLC12A9	Solute carrier family 12 member 9. (907 aa)
	SLC18A2	Solute carrier family 18 member A2. (523 aa)
	SLC6A4	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (660 aa)
	SLC6A2	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (639 aa)
	LOC102351499	Zgc:153039. (902 aa)
	LOC102360278	Uncharacterized protein. (1069 aa)
	SLC6A1	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (601 aa)
	M3XL67_LATCH	Uncharacterized protein. (157 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102367330	SLC18A2	ENSLACP00000008657	ENSLACP00000014809	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Solute carrier family 18 member A2.	0.449
SLC12A3	SLC6A2	ENSLACP00000011638	ENSLACP00000016273	Solute carrier family 12 member 3.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.523
SLC12A4	SLC6A2	ENSLACP00000002939	ENSLACP00000016273	Uncharacterized protein.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.708
SLC18A2	LOC102367330	ENSLACP00000014809	ENSLACP00000008657	Solute carrier family 18 member A2.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.449
SLC18A2	SLC6A2	ENSLACP00000014809	ENSLACP00000016273	Solute carrier family 18 member A2.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.509
SLC18A2	SLC6A3	ENSLACP00000014809	ENSLACP00000002580	Solute carrier family 18 member A2.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.684
SLC18A2	SLC6A4	ENSLACP00000014809	ENSLACP00000016259	Solute carrier family 18 member A2.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.449
SLC6A2	SLC12A3	ENSLACP00000016273	ENSLACP00000011638	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Solute carrier family 12 member 3.	0.523
SLC6A2	SLC12A4	ENSLACP00000016273	ENSLACP00000002939	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Uncharacterized protein.	0.708
SLC6A2	SLC18A2	ENSLACP00000016273	ENSLACP00000014809	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Solute carrier family 18 member A2.	0.509
SLC6A3	SLC18A2	ENSLACP00000002580	ENSLACP00000014809	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Solute carrier family 18 member A2.	0.684
SLC6A4	SLC18A2	ENSLACP00000016259	ENSLACP00000014809	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Solute carrier family 18 member A2.	0.449