(10 nodes) Efflux transmembrane transporter activity network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3A5I8_LATCH	ABC transporter domain-containing protein. (665 aa)
	H2ZWV5_LATCH	Solute carrier family 27 member 1a. (655 aa)
	SLC29A4	Solute carrier family 29 member 4. (527 aa)
	ABCG2	ABC transporter domain-containing protein. (607 aa)
	LOC102361283	ATP-binding cassette, sub-family G (WHITE), member 2b. (634 aa)
	LOC102355229	Uncharacterized protein. (1401 aa)
	ABCC5	ATP binding cassette subfamily C member 5. (1433 aa)
	H3B9T5_LATCH	Uncharacterized protein. (665 aa)
	H3BD64_LATCH	Xenotropic and polytropic retrovirus receptor 1b. (669 aa)
	ABCB6	ATP binding cassette subfamily B member 6 (Langereis blood group). (776 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCB6	ABCC5	ENSLACP00000020225	ENSLACP00000017733	ATP binding cassette subfamily B member 6 (Langereis blood group).	ATP binding cassette subfamily C member 5.	0.525
ABCB6	LOC102355229	ENSLACP00000020225	ENSLACP00000016199	ATP binding cassette subfamily B member 6 (Langereis blood group).	Uncharacterized protein.	0.407
ABCC5	ABCB6	ENSLACP00000017733	ENSLACP00000020225	ATP binding cassette subfamily C member 5.	ATP binding cassette subfamily B member 6 (Langereis blood group).	0.525
ABCC5	ABCG2	ENSLACP00000017733	ENSLACP00000001331	ATP binding cassette subfamily C member 5.	ABC transporter domain-containing protein.	0.431
ABCC5	LOC102355229	ENSLACP00000017733	ENSLACP00000016199	ATP binding cassette subfamily C member 5.	Uncharacterized protein.	0.901
ABCC5	LOC102361283	ENSLACP00000017733	ENSLACP00000010788	ATP binding cassette subfamily C member 5.	ATP-binding cassette, sub-family G (WHITE), member 2b.	0.427
ABCG2	ABCC5	ENSLACP00000001331	ENSLACP00000017733	ABC transporter domain-containing protein.	ATP binding cassette subfamily C member 5.	0.431
ABCG2	H3A5I8_LATCH	ENSLACP00000001331	ENSLACP00000004909	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.901
ABCG2	LOC102361283	ENSLACP00000001331	ENSLACP00000010788	ABC transporter domain-containing protein.	ATP-binding cassette, sub-family G (WHITE), member 2b.	0.904
H3A5I8_LATCH	ABCG2	ENSLACP00000004909	ENSLACP00000001331	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.901
H3A5I8_LATCH	LOC102361283	ENSLACP00000004909	ENSLACP00000010788	ABC transporter domain-containing protein.	ATP-binding cassette, sub-family G (WHITE), member 2b.	0.904
LOC102355229	ABCB6	ENSLACP00000016199	ENSLACP00000020225	Uncharacterized protein.	ATP binding cassette subfamily B member 6 (Langereis blood group).	0.407
LOC102355229	ABCC5	ENSLACP00000016199	ENSLACP00000017733	Uncharacterized protein.	ATP binding cassette subfamily C member 5.	0.901
LOC102361283	ABCC5	ENSLACP00000010788	ENSLACP00000017733	ATP-binding cassette, sub-family G (WHITE), member 2b.	ATP binding cassette subfamily C member 5.	0.427
LOC102361283	ABCG2	ENSLACP00000010788	ENSLACP00000001331	ATP-binding cassette, sub-family G (WHITE), member 2b.	ABC transporter domain-containing protein.	0.904
LOC102361283	H3A5I8_LATCH	ENSLACP00000010788	ENSLACP00000004909	ATP-binding cassette, sub-family G (WHITE), member 2b.	ABC transporter domain-containing protein.	0.904