(74 nodes) L-amino acid transport network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M3XKS0_LATCH	Uncharacterized protein. (143 aa)
	LOC102352322	Aamy domain-containing protein. (520 aa)
	SLC32A1	Solute carrier family 32 member 1. (520 aa)
	H2ZRR7_LATCH	Aa_trans domain-containing protein. (101 aa)
	SLC17A6	Solute carrier family 17 member 6. (391 aa)
	H2ZSK8_LATCH	TYR_PHOSPHATASE_2 domain-containing protein. (101 aa)
	SLC1A5	Amino acid transporter. (565 aa)
	SLC43A1	Solute carrier family 43 member 1. (556 aa)
	SLC38A1	Solute carrier family 38 member 1. (410 aa)
	H2ZVD1_LATCH	Uncharacterized protein. (104 aa)
	SLC25A29	Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. (297 aa)
	LOC102356967	Aa_trans domain-containing protein. (369 aa)
	SLC1A3	Amino acid transporter. (441 aa)
	LOC102355973	Si:dkeyp-120h9.1. (681 aa)
	CLN8	CLN8 transmembrane ER and ERGIC protein. (294 aa)
	SLC6A20	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (593 aa)
	SLC7A7	Solute carrier family 7 member 7. (518 aa)
	CLN3	Battenin. (406 aa)
	SLC7A13	Uncharacterized protein. (270 aa)
	SLC66A1L	Uncharacterized protein. (309 aa)
	SLC1A7	Amino acid transporter. (497 aa)
	EPM2A	EPM2A glucan phosphatase, laforin. (228 aa)
	SLC7A2	Solute carrier family 7 member 2. (672 aa)
	SLC25A13	Solute carrier family 25 member 13; Belongs to the mitochondrial carrier (TC 2.A.29) family. (682 aa)
	SLC43A2	Solute carrier family 43 member 2. (492 aa)
	SLC38A2	Solute carrier family 38 member 2. (529 aa)
	SLC7A6	Solute carrier family 7 member 6. (472 aa)
	H3A870_LATCH	Uncharacterized protein. (277 aa)
	SLC7A8	Solute carrier family 7 member 8. (528 aa)
	SLC38A9	Solute carrier family 38 member 9. (561 aa)
	H3A9B7_LATCH	Uncharacterized protein. (521 aa)
	LOC102354981	Uncharacterized protein. (514 aa)
	SLC25A38	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix. Required during erythropoiesis. Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. (307 aa)
	H3ABV2_LATCH	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (318 aa)
	SLC66A1	Solute carrier family 66 member 1. (318 aa)
	SLC25A12	Solute carrier family 25 member 12; Belongs to the mitochondrial carrier (TC 2.A.29) family. (677 aa)
	H3AEZ9_LATCH	Uncharacterized protein. (491 aa)
	H3AG31_LATCH	Aa_trans domain-containing protein. (462 aa)
	LOC102351543	Aa_trans domain-containing protein. (253 aa)
	SLC38A8	Solute carrier family 38 member 8. (441 aa)
	SLC1A1	Amino acid transporter. (523 aa)
	SLC7A1	Solute carrier family 7 member 1. (658 aa)
	LOC102354610	Zmp:0000001267. (490 aa)
	CCDC77	Coiled-coil domain containing 77. (465 aa)
	SLC25A15	Solute carrier family 25 member 15; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)
	SLC38A4	Solute carrier family 38 member 4. (547 aa)
	SLC7A11	Solute carrier family 7 member 11. (501 aa)
	H3AM63_LATCH	Aa_trans domain-containing protein. (408 aa)
	SLC38A5	Solute carrier family 38 member 5. (206 aa)
	SLC7A10	Solute carrier family 7 member 10. (345 aa)
	H3AQD8_LATCH	Uncharacterized protein. (565 aa)
	SLC3A1	Solute carrier family 3 member 1. (681 aa)
	H3AQM3_LATCH	Aa_trans domain-containing protein. (401 aa)
	PSEN1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (465 aa)
	H3ATR4_LATCH	Uncharacterized protein. (466 aa)
	SLC38A10	Solute carrier family 38 member 10. (1096 aa)
	LOC102353411	Uncharacterized protein. (491 aa)
	SLC1A2	Amino acid transporter. (566 aa)
	SLC17A7	MFS domain-containing protein. (560 aa)
	SLC1A6	Amino acid transporter. (547 aa)
	SLC1A4	Amino acid transporter. (188 aa)
	H3B1Q1_LATCH	Amino acid transporter. (383 aa)
	ARL6IP5	PRA1 family protein. (196 aa)
	H3B1W9_LATCH	Solute carrier family 38 member 3b. (442 aa)
	LOC102358762	Amino acid transporter. (538 aa)
	SLC7A5	Solute carrier family 7 member 5. (522 aa)
	SLC7A3	Solute carrier family 7 member 3. (634 aa)
	LOC102350594	AA_permease_C domain-containing protein. (618 aa)
	SLC17A8	Solute carrier family 17 member 8. (439 aa)
	LOC102345634	Amino acid transporter. (345 aa)
	LOC102362994	Solute carrier family 25 member 55b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (335 aa)
	SLC25A22	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (323 aa)
	SLC36A1	Solute carrier family 36 member 1. (390 aa)
	CTNS	Cystinosin, lysosomal cystine transporter. (340 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL6IP5	SLC1A1	ENSLACP00000015834	ENSLACP00000008804	PRA1 family protein.	Amino acid transporter.	0.625
CLN3	CLN8	ENSLACP00000003902	ENSLACP00000002597	Battenin.	CLN8 transmembrane ER and ERGIC protein.	0.685
CLN3	CTNS	ENSLACP00000003902	ENSLACP00000023270	Battenin.	Cystinosin, lysosomal cystine transporter.	0.553
CLN8	CLN3	ENSLACP00000002597	ENSLACP00000003902	CLN8 transmembrane ER and ERGIC protein.	Battenin.	0.685
CTNS	CLN3	ENSLACP00000023270	ENSLACP00000003902	Cystinosin, lysosomal cystine transporter.	Battenin.	0.553
CTNS	H3A870_LATCH	ENSLACP00000023270	ENSLACP00000005841	Cystinosin, lysosomal cystine transporter.	Uncharacterized protein.	0.474
CTNS	SLC66A1	ENSLACP00000023270	ENSLACP00000007353	Cystinosin, lysosomal cystine transporter.	Solute carrier family 66 member 1.	0.858
EPM2A	H2ZSK8_LATCH	ENSLACP00000004885	ENSLACP00000000379	EPM2A glucan phosphatase, laforin.	TYR_PHOSPHATASE_2 domain-containing protein.	0.921
H2ZRR7_LATCH	SLC38A9	ENSLACP00000000088	ENSLACP00000006212	Aa_trans domain-containing protein.	Solute carrier family 38 member 9.	0.426
H2ZSK8_LATCH	EPM2A	ENSLACP00000000379	ENSLACP00000004885	TYR_PHOSPHATASE_2 domain-containing protein.	EPM2A glucan phosphatase, laforin.	0.921
H3A870_LATCH	CTNS	ENSLACP00000005841	ENSLACP00000023270	Uncharacterized protein.	Cystinosin, lysosomal cystine transporter.	0.474
H3A9B7_LATCH	H3AEZ9_LATCH	ENSLACP00000006238	ENSLACP00000008220	Uncharacterized protein.	Uncharacterized protein.	0.765
H3A9B7_LATCH	H3ATR4_LATCH	ENSLACP00000006238	ENSLACP00000013035	Uncharacterized protein.	Uncharacterized protein.	0.752
H3A9B7_LATCH	H3B1Q1_LATCH	ENSLACP00000006238	ENSLACP00000015822	Uncharacterized protein.	Amino acid transporter.	0.444
H3A9B7_LATCH	LOC102345634	ENSLACP00000006238	ENSLACP00000020079	Uncharacterized protein.	Amino acid transporter.	0.503
H3A9B7_LATCH	LOC102350594	ENSLACP00000006238	ENSLACP00000019726	Uncharacterized protein.	AA_permease_C domain-containing protein.	0.407
H3A9B7_LATCH	LOC102353411	ENSLACP00000006238	ENSLACP00000013468	Uncharacterized protein.	Uncharacterized protein.	0.765
H3A9B7_LATCH	LOC102354610	ENSLACP00000006238	ENSLACP00000009240	Uncharacterized protein.	Zmp:0000001267.	0.765
H3A9B7_LATCH	LOC102354981	ENSLACP00000006238	ENSLACP00000006272	Uncharacterized protein.	Uncharacterized protein.	0.750
H3A9B7_LATCH	LOC102355973	ENSLACP00000006238	ENSLACP00000002144	Uncharacterized protein.	Si:dkeyp-120h9.1.	0.750